Table 1D View:    

Structure File Format:     

EX IP # IIP RC # IRC RISL L # PG Phylogeny Org [TaxID] Acc Structure Comment
16S 516 272 IC1 123 334 - 1789 N 8 cellular organisms »
Eukaryota »
Rhodophyta »
Bangiophyceae »
Bangiales »
... » 		Porphyra tenera
[2785]		 AB029882
   P2 P2.1 missing some part
AB100959
    
AB100958
    
AB000964
    
AB101442
    
AB029884
   P2 P2.1 missing some part
AB029883
   P2 P2.1 missing some part
D86237
   intron not annotated
D86236
   intron not annotated
AB029880
    
AB029879
    
AB013175
    
AB013176
    
AB029881
    
Bangia fuscopurpurea
[101920]		 AF172557
 b.I1 Australia/AU; exon sequence from AF175531
AF172556
   France: Nice; exon sequence from AF175535
AF172555
   New Jersey/NJ; exon sequence from AF169335
AF172558
   Greece/GR; exon sequence from AF175533
AF172559
   North Carolina/NC; exon sequence from AF043363
AF172570
   Newfoundland/NF; exon sequence from AF043357
AF172569
   Ireland/IR; exon sequence from AF175534
AB053488
    
AB053489
    
AF172571
   Nova Scotia/NS; exon sequence from AF169337
AF172572
 b.I1 Oregon/OR; exon sequence from AF043358
AF172567
   Victoria/BC2; exon sequence from AF043359
AF172568
   California/CA; exon sequence from AF043356
AF342745
 b.I1  
AF172560
   Germany: Helgoland/HL; exon sequence from AF175532
AF172561
   Massachusetts/MA; exon sequence from AF043362
Porphyra suborbiculata
[76158]		 AB015796
    
AF136424
   synonym Porphyra lilliputiana
AF378654
   synonym Porphyra carolinensis
AF378657
    
AF378656
    
AF378655
    
AF378665
   synonym Porphyra lilliputiana
AF378664
   synonym Porphyra lilliputiana
AF378663
   synonym Porphyra lilliputiana
AF378662
   synonym Porphyra lilliputiana
AF378659
   synonym Porphyra lilliputiana
AF378661
   synonym Porphyra lilliputiana
AF378653
   synonym Porphyra carolinensis
AF378649
   synonym Porphyra lilliputiana
AF378658
   synonym Porphyra lilliputiana
AF133792
   synonym Porphyra carolinensis
AF378660
   synonym Porphyra lilliputiana
AB013180
    
AF378651
   synonym Porphyra lilliputiana
AF378650
   synonym Porphyra lilliputiana
AF378652
    
Porphyra sp. Baleia
[298901]		 AY766358
    
Bangia sp. strain BGA458
[224387]		 AY184341
    
Bangia sp.
[76713]		 AF172578
 b.I1 Virgin Islands/VIS7; exon sequence from AF043364
Bangia atropurpurea
[31347]		 D88387
 b.I1  
AB053491
    
AF172565
   England River Thames/BI12; exon sequence from AF043365
AF172563
   Ireland/IR; exon sequence from AF043365
AF172562
   Netherlands/NL: Ysselmeer; exon sequence from AF169341
AF172566
   Great Lakes/GL; exon sequence from AF043365
AF172564
   Italy/IT; exon sequence from AF043365
Porphyra yezoensis
[2788]		 AY131005
    
D79976
 a.I1  
AB013178
    
AB013177
    
Bangia sp. strain BNS727
[224391]		 AY184345
    
Porphyra umbilicalis
[2786]		 AF172573
   New Jersey/NJ; exon from AF175553
Porphyra purpurea
[2787]		 AF172575
   exon sequence from AF175551
Porphyra sp. Wales SW1
[144555]		 AF172574
   exon from AF175554
Porphyra rakiura
[199481]		 AF136425
    
AY139682
    
AY139684
    
Porphyra onoi
[78445]		 AB015794
    
Bangia sp. strain BDS725
[224384]		 AY184337
    
Porphyra torta
[139733]		 AF172579
   exon sequence from AF175552
Porphyra sp. strain GRB488
[224396]		 AY184350
    
Bangia sp. strain BWP662
[224394]		 AY184348
    
Porphyra sp.
[2790]		 AF136420
    
AB013182
    
Porphyra leucosticta
[35146]		 AF172576
   exon sequence from AF175557
AF342746
 b.I1  
Porphyra sp. strain GRB145
[224395]		 AY184349
    
Porphyra haitanensis
[76159]		 AB015795
    
Porphyra pseudolinearis
[81939]		 AB013185
    
Porphyra lucasii
[209571]		 AY139685
   synonym: Porphyra sp. WELT A23051
Porphyra katadae
[76161]		 AB013184
    
Porphyra nereocystis
[139730]		 AF172577
   exon sequence from AF175542
Porphyra dentata
[76160]		 AB013183
    
Porphyra cinnamomea
[199484]		 AF136418
AF136419
    
Porphyra capensis
[298899]		 AY766361
    
Porphyra kanakaensis
[139729]		 AF172580
   exon sequence from AF175556
Porphyra tenuipedalis
[78446]		 AB015797
    
cellular organisms »
Eukaryota »
Heterolobosea »
Schizopyrenida »
Vahlkampfiidae »
... » 		Naegleria sp.
[37103]		 X79069
    
X79070
    
X79071
    
AJ001399
    
Y10190
    
Naegleria andersoni
[5764]		 Z16417
    
 
   LIT: J. Eukaryot. Microbiol. 40(2):179-187 (1993).
X78280
    
Naegleria clarki
[36333]		 X78281
    
AF338422
    
AF338420
    
AF338419
    
AF338418
    
AF338417
    
Naegleria jamiesoni
[36335]		 X78279
    
Naegleria gruberi
[5762]		 X78278
    
Naegleria italica
[36334]		 X78277
    
cellular organisms »
Eukaryota »
stramenopiles »
Pelagophyceae »
Aureoumbra »
... » 		Aureoumbra lagunensis
[44058]		 U40258
 b.I1 annotated as insertion
cellular organisms »
Eukaryota »
Amoebozoa »
Mycetozoa »
Myxogastria »
... » 		Badhamia gracilis
[227449]		 AJ555451
    
Physarum flavicomum
[35220]		 AJ555453
AJ555454
    
Fuligo septica
[159720]		 AJ584697
    
AJ555452
    
cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Chytridiomycota »
... » 		Spizellomyces punctatus
[109760]		 AY546684
    
cellular organisms »
Eukaryota »
Euglenozoa »
Euglenida »
Heteronematales »
... » 		Ploeotia costata
[211463]		 AF525486
    
cellular organisms »
Eukaryota »
Amoebozoa »
Centramoebida »
Acanthamoebidae »
... » 		Acanthamoeba griffini
[29195]		 S81337
 b.I1  
U02540
U07412
 b.I1  
Acanthamoeba sp. KA/E4
[156883]		 AF349045
    
Acanthamoeba sp. KA/MSS6
[215575]		 AY173014
    
Acanthamoeba sp. KA/MSS7
[215576]		 AY173015
    
Acanthamoeba sp. KA/MSS2
[215574]		 AY173013
    
cellular organisms »
Eukaryota »
Rhodophyta »
Rhodellophyceae »
Rhodellales »
... » 		Rhodella sp. MBIC10593
[284791]		 AB183619