EX | RC | IP | L | Phylogeny | Organism [TaxID] | Accession | Structure | Comment |
---|---|---|---|---|---|---|---|---|
16S | IC1 | 516 | N | cellular organisms » Eukaryota » Amoebozoa » Centramoebida » Acanthamoebidae » ... |
Acanthamoeba griffini [29195] |
U02540 U07412 |
b.I1 | |
S81337 |
b.I1 | |||||||
Acanthamoeba sp. KA/E4 [156883] |
AF349045 |
|||||||
Acanthamoeba sp. KA/MSS2 [215574] |
AY173013 |
|||||||
Acanthamoeba sp. KA/MSS6 [215575] |
AY173014 |
|||||||
Acanthamoeba sp. KA/MSS7 [215576] |
AY173015 |
|||||||
cellular organisms » Eukaryota » Amoebozoa » Mycetozoa » Myxogastria » ... |
Badhamia gracilis [227449] |
AJ555451 |
||||||
Fuligo septica [159720] |
AJ584697 |
|||||||
AJ555452 |
||||||||
Physarum flavicomum [35220] |
AJ555453 AJ555454 |
|||||||
cellular organisms » Eukaryota » Euglenozoa » Euglenida » Heteronematales » ... |
Ploeotia costata [211463] |
AF525486 |
||||||
cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Chytridiomycota » ... |
Spizellomyces punctatus [109760] |
AY546684 |
||||||
cellular organisms » Eukaryota » Heterolobosea » Schizopyrenida » Vahlkampfiidae » ... |
Naegleria andersoni [5764] |
Z16417 |
||||||
LIT: J. Eukaryot. Microbiol. 40(2):179-187 (1993). | ||||||||
X78280 |
||||||||
Naegleria clarki [36333] |
AF338417 |
|||||||
AF338418 |
||||||||
AF338419 |
||||||||
AF338420 |
||||||||
AF338422 |
||||||||
X78281 |
||||||||
Naegleria gruberi [5762] |
X78278 |
|||||||
Naegleria italica [36334] |
X78277 |
|||||||
Naegleria jamiesoni [36335] |
X78279 |
|||||||
Naegleria sp. [37103] |
X79069 |
|||||||
X79070 |
||||||||
X79071 |
||||||||
AJ001399 |
||||||||
Y10190 |
||||||||
cellular organisms » Eukaryota » Rhodophyta » Bangiophyceae » Bangiales » ... |
Bangia atropurpurea [31347] |
AF172563 |
Ireland/IR; exon sequence from AF043365 | |||||
AF172565 |
England River Thames/BI12; exon sequence from AF043365 | |||||||
AF172562 |
Netherlands/NL: Ysselmeer; exon sequence from AF169341 | |||||||
AB053491 |
||||||||
D88387 |
b.I1 | |||||||
AF172564 |
Italy/IT; exon sequence from AF043365 | |||||||
AF172566 |
Great Lakes/GL; exon sequence from AF043365 | |||||||
Bangia fuscopurpurea [101920] |
AF172571 |
Nova Scotia/NS; exon sequence from AF169337 | ||||||
AF172557 |
b.I1 | Australia/AU; exon sequence from AF175531 | ||||||
AF172556 |
France: Nice; exon sequence from AF175535 | |||||||
AF172555 |
New Jersey/NJ; exon sequence from AF169335 | |||||||
AF172559 |
North Carolina/NC; exon sequence from AF043363 | |||||||
AF172558 |
Greece/GR; exon sequence from AF175533 | |||||||
AF172570 |
Newfoundland/NF; exon sequence from AF043357 | |||||||
AF172569 |
Ireland/IR; exon sequence from AF175534 | |||||||
AB053488 |
||||||||
AB053489 |
||||||||
AF172572 |
b.I1 | Oregon/OR; exon sequence from AF043358 | ||||||
AF172567 |
Victoria/BC2; exon sequence from AF043359 | |||||||
AF172568 |
California/CA; exon sequence from AF043356 | |||||||
AF342745 |
b.I1 | |||||||
AF172560 |
Germany: Helgoland/HL; exon sequence from AF175532 | |||||||
AF172561 |
Massachusetts/MA; exon sequence from AF043362 | |||||||
Bangia sp. strain BDS725 [224384] |
AY184337 |
|||||||
Bangia sp. strain BGA458 [224387] |
AY184341 |
|||||||
Bangia sp. strain BNS727 [224391] |
AY184345 |
|||||||
Bangia sp. strain BWP662 [224394] |
AY184348 |
|||||||
Bangia sp. [76713] |
AF172578 |
b.I1 | Virgin Islands/VIS7; exon sequence from AF043364 | |||||
Porphyra capensis [298899] |
AY766361 |
|||||||
Porphyra cinnamomea [199484] |
AF136418 AF136419 |
|||||||
Porphyra dentata [76160] |
AB013183 |
|||||||
Porphyra haitanensis [76159] |
AB015795 |
|||||||
Porphyra kanakaensis [139729] |
AF172580 |
exon sequence from AF175556 | ||||||
Porphyra katadae [76161] |
AB013184 |
|||||||
Porphyra leucosticta [35146] |
AF172576 |
exon sequence from AF175557 | ||||||
AF342746 |
b.I1 | |||||||
Porphyra lucasii [209571] |
AY139685 |
synonym: Porphyra sp. WELT A23051 | ||||||
Porphyra nereocystis [139730] |
AF172577 |
exon sequence from AF175542 | ||||||
Porphyra onoi [78445] |
AB015794 |
|||||||
Porphyra pseudolinearis [81939] |
AB013185 |
|||||||
Porphyra purpurea [2787] |
AF172575 |
exon sequence from AF175551 | ||||||
Porphyra rakiura [199481] |
AF136425 |
|||||||
AY139682 |
||||||||
AY139684 |
||||||||
Porphyra sp. [2790] |
AB013182 |
|||||||
AF136420 |
||||||||
Porphyra suborbiculata [76158] |
AF136424 |
synonym Porphyra lilliputiana | ||||||
AF378657 |
||||||||
AF378662 |
synonym Porphyra lilliputiana | |||||||
AF378663 |
synonym Porphyra lilliputiana | |||||||
AF378664 |
synonym Porphyra lilliputiana | |||||||
AF378665 |
synonym Porphyra lilliputiana | |||||||
AF378655 |
||||||||
AF378656 |
||||||||
AF378650 |
synonym Porphyra lilliputiana | |||||||
AF378651 |
synonym Porphyra lilliputiana | |||||||
AB013180 |
||||||||
AF378652 |
||||||||
AF378660 |
synonym Porphyra lilliputiana | |||||||
AF378661 |
synonym Porphyra lilliputiana | |||||||
AB015796 |
||||||||
AF133792 |
synonym Porphyra carolinensis | |||||||
AF378653 |
synonym Porphyra carolinensis | |||||||
AF378654 |
synonym Porphyra carolinensis | |||||||
AF378649 |
synonym Porphyra lilliputiana | |||||||
AF378658 |
synonym Porphyra lilliputiana | |||||||
AF378659 |
synonym Porphyra lilliputiana | |||||||
Porphyra tenera [2785] |
AB029880 |
|||||||
AB029879 |
||||||||
AB013175 |
||||||||
AB013176 |
||||||||
AB029881 |
||||||||
D86236 |
intron not annotated | |||||||
D86237 |
intron not annotated | |||||||
AB029883 |
P2 P2.1 missing some part | |||||||
AB000964 |
||||||||
AB029884 |
P2 P2.1 missing some part | |||||||
AB100958 |
||||||||
AB100959 |
||||||||
AB029882 |
P2 P2.1 missing some part | |||||||
AB101442 |
||||||||
Porphyra tenuipedalis [78446] |
AB015797 |
|||||||
Porphyra torta [139733] |
AF172579 |
exon sequence from AF175552 | ||||||
Porphyra umbilicalis [2786] |
AF172573 |
New Jersey/NJ; exon from AF175553 | ||||||
Porphyra yezoensis [2788] |
AY131005 |
|||||||
D79976 |
a.I1 | |||||||
AB013177 |
||||||||
AB013178 |
||||||||
Porphyra sp. Baleia [298901] |
AY766358 |
|||||||
Porphyra sp. Wales SW1 [144555] |
AF172574 |
exon from AF175554 | ||||||
Porphyra sp. strain GRB145 [224395] |
AY184349 |
|||||||
Porphyra sp. strain GRB488 [224396] |
AY184350 |
|||||||
cellular organisms » Eukaryota » Rhodophyta » Rhodellophyceae » Rhodellales » ... |
Rhodella sp. MBIC10593 [284791] |
AB183619 |
||||||
cellular organisms » Eukaryota » stramenopiles » Pelagophyceae » Aureoumbra » ... |
Aureoumbra lagunensis [44058] |
U40258 |
b.I1 | annotated as insertion |