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Table 2B: Number of rRNA Introns, Intron Position, and Phylogenetic Group for Intron Type I

Structure File Format:PS  PDF  BPSEQ 

EX	RC	IP	L	Phylogeny	Organism [TaxID]	Accession	Structure	Comment
23S	I	569	N	cellular organisms » Eukaryota » Amoebozoa » Mycetozoa » Myxogastria » ...	Fuligo septica [159720]	AJ584697
		730	C	cellular organisms » Eukaryota » Viridiplantae » Chlorophyta » Chlorophyceae » ...	Chlamydomonas indica [28457]	Z17228		LIT: J. Mol. Biol. 232:446-467 (1993).
		779	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Buellia geophila [205604]	AY773917
					Buellia griseovirens [205605]	AY773910
					Diplotomma alboatrum [205613]	AY452500
					Diplotomma epipolium [501307]	AY773916
					Physcia aipolia [50936]	AY773914
					Physcia stellaris [116821]	AY773912
					Physcia tenella [116822]	AY773908
					Physconia enteroxantha [114787]	AY773909
					Physconia grisea [114791]	AY773921
					Rinodina atrocinerea [144699]	AY773923
					Rinodina capensis [299119]	AY773924
					Rinodina milvina [205640]	AY773922
		798	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Pyrenula pseudobufonia [271832]	AY640962
					Pyrgillus javanicus [279161]	DQ823103
					Dermatocarpon miniatum [172328]	AY584644
					Endocarpon pallidulum [396380]	DQ823097
					Verrucaria pachyderma [168926]	AF356668
					Trichoglossum hirsutum [265104]	AY533014
						AY640976
					Acarospora schleicheri [88748]	AY640945
					Glypholecia scabra [286398]	AY640951
					Biatoridium monasteriense [286569]	AY640947
					Arthrorhaphis citrinella [146290]	AF279376
					Tholurna dissimilis [211490]	AY453644
					Cladonia caroliniana [174049]	AY584640
					Rhizoplaca chrysoleuca [112062]	AY648104
					Rhizoplaca huashanensis [239500]	AY648105
					Melanelixia fuliginosa [180412]	AJ421428		synonym: Melanelia fuliginosa
					Buellia griseovirens [205605]	AY773910
					Physcia aipolia [50936]	AY773914
					Physcia stellaris [116821]	AY773912
					Physcia tenella [116822]	AY773908
					Physconia distorta [114786]	AY773913
					Physconia enteroxantha [114787]	AY773909
					Physconia perisidiosa [114789]	AY773911
					Koerberiella wimmeriana [273088]	AY532986
					Protoblastenia rupestris [258902]	AY533008
					Bacidia rosella [93112]	AY300829
					Bacidia schweinitzii [161808]	DQ782911
					Anzina carneonivea [129529]	AY212829
					Trapelia chiodectonoides [223410]	AY212847
					Coenogonium leprieurii [185321]	AF465442
					Gyalecta hypoleuca [185327]	AF465453
					Gyalecta jenensis [146295]	AF465450
					Gyalecta thelotremella [185328]	AF465455
					Porina guentheri [146306]	AF279405
					Ostropa barbara [271838]	AY584642
					Stictis radiata [38076]	AF356663
					Hymenelia epulotica [146300]	AF279394
					Hymenelia lacustris [196135]	AY533006
						AY640953
					Pertusaria hymenea [133177]	AF279297
					Pertusaria kalelae [133180]	AF279298
					Pertusaria oculata [267812]	AY568005
					Roccella boergesenii [279123]	AY548814
		800	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Acarospora cervina [286391]	AY640941
					Acarospora complanata [168909]	AF356654
					Acarospora hilaris [286392]	AY640942
					Acarospora laqueata [286393]	AY640943
					Pleopsidium chlorophanum [247144]	AY640960
					Polysporina simplex [286400]	AY640961
					Sarcogyne regularis var. regularis [286403]	AY640964
Umbilicaria vellea [87287]	AY645340
Notolecidea subcontinua [273062]	AY532987
Calicium adaequatum [262410]	AY452502
	AY452503
Calicium glaucellum [262413]	AY453646
Hypocenomyce scalaris [318760]	DQ782914
Rinodina tunicata [144718]	AF457568
	AY773920
Nephroma arcticum [48859]	AF286828
Massalongia carnosa [161978]	AF286827
Tremolecia atrata [273074]	AY533007
958	C	cellular organisms » Eukaryota » Viridiplantae » Chlorophyta » Chlorophyceae » ...	Chlamydomonas indica [28457]	Z17228		LIT: J. Mol. Biol. 232:446-467 (1993).
1025	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Coccotrema pocillarium [129502]	AF274093
			Pyrgillus javanicus [279161]	DQ823103
			Calicium abietinum [262409]	AY452501
			Calicium adspersum [57086]	AY452504
			Calicium montanum [262416]	AY453635
			Tholurna dissimilis [211490]	AY453644
			Cladonia rangiferina [111670]	AY533000
			Lecanora cenisia [273117]	AY532992
			Lecanora concolor [108937]	AY640954
			Strangospora pinicola [286408]	AY640970
				AY640971
			Mycoblastus sanguinarius [312200]	DQ782915
			Melanelixia fuliginosa [180412]	AJ421428		synonym: Melanelia fuliginosa
				AJ421435		synonym: Melanelia fuliginosa
			Melanohalea elegantula [172622]	AJ421437		synonym: Melanelia elegantula
			Melanohalea exasperata [180418]	AJ421438		synonym: Melanelia exasperata
			Melanohalea exasperatula [180417]	AJ421436		synonym: Melanelia exasperatula
			Buellia geophila [205604]	AY773917
			Buellia griseovirens [205605]	AY773910
			Buellia muriformis [196133]	AY773925
			Physconia distorta [114786]	AY773913
			Physconia enteroxantha [114787]	AY773909
			Physconia grisea [114791]	AY773921
			Rinodina capensis [299119]	AY773924
			Rinodina milvina [205640]	AY773922
			Rinodina tunicata [144718]	AY773920
			Porpidia albocaerulescens [168922]	AY532938
				AF356676
			Porpidia albocaerulescens var. polycarpiza [273122]	AY532937
			Protoblastenia rupestris [258902]	AY533008
			Gyalecta jenensis [146295]	AF279391
				AF465450
1065	C	cellular organisms » Eukaryota » Viridiplantae » Chlorophyta » Chlorophyceae » ...	Chlamydomonas indica [28457]	Z17228		LIT: J. Mol. Biol. 232:446-467 (1993).
1090	N	cellular organisms » Eukaryota » Amoebozoa » Mycetozoa » Myxogastria » ...	Fuligo septica [159720]	AJ584697
		cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Thelocarpella gordensis [286411]	AY640974
			Acarospora clauzadeana [286396]	AY640946
			Acarospora macrospora subsp. macrospora [286395]	AY640944
			Acarospora schleicheri [88748]	AY640945
			Glypholecia scabra [286398]	AY640951
			Polysporina simplex [286400]	AY640961
			Biatoridium monasteriense [286569]	AY640947
			Calicium glaucellum [262413]	AY453646
			Calicium tricolor [39939]	AY453637
			Lecanora hybocarpa [394998]	DQ782910
			Rhizoplaca chrysoleuca [112062]	AY648104
			Scoliciosporum umbrinum [93123]	AY640967
			Mycoblastus sanguinarius [312200]	DQ782915
			Melanelia disjuncta [180415]	AJ421431
			Melanohalea elegantula [172622]	AJ421437		synonym: Melanelia elegantula
			Melanohalea exasperatula [180417]	AJ421436		synonym: Melanelia exasperatula
			Parmotrema tinctorum [235862]	AY584635
			Xanthoparmelia pulla [172623]	AJ421433		synonym Neofuscelia pulla
			Buellia alboatra [116790]	AY773915
			Buellia geophila [205604]	AY773917
			Diplotomma alboatrum [205613]	AY452500
			Diplotomma epipolium [501307]	AY773916
			Phaeophyscia orbicularis [116805]	AY773926
			Physcia aipolia [50936]	DQ782904
			Immersaria usbekica [273086]	AY532985
			Porpidia carlottiana [273093]	AY532940
			Fuscidea lygaea [286414]	AY640950
			Coenogonium leprieurii [185321]	AF465442
			Gyalecta hypoleuca [185327]	AF465453
			Porina guentheri [146306]	AF279405
			Acarosporina microspora [271836]	AY584643
			Hymenelia lacustris [196135]	AY533006
		cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Fungi incertae sedis » ...	Coemansia reversa [61392]	AY546689
1094	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Symbiotaphrina buchneri [40220]	DQ248313
			Dermatocarpon luridum [172326]	AY640948
			Dermatocarpon miniatum [172328]	AY584644
			Verrucaria pachyderma [168926]	AF356668
			Acarospora canadensis [286390]	AY640940
			Acarospora cf. dissipata [168908]	AF356656
			Acarospora complanata [168909]	AF356654
			Acarospora hilaris [286392]	AY640942
			Sarcogyne regularis var. regularis [286403]	AY640964
			Calicium adaequatum [262410]	AY452502
			Lecanora cenisia [273117]	AY532992
			Rhizoplaca huashanensis [239500]	AY648105
			Melanelia stygia [112444]	AJ421434
			Amandinea punctata [116786]	AY773918
			Anaptychia runcinata [116789]	AY773919
			Physcia stellaris [116821]	AY773912
			Physcia tenella [116822]	AY773908
			Physconia distorta [114786]	AY773913
			Physconia grisea [114791]	AY773921
			Physconia perisidiosa [114789]	AY773911
			Rinodina atrocinerea [144699]	AY773923
			Rinodina milvina [205640]	AY773922
			Rinodina tunicata [144718]	AF457569
				AY773920
			Trapeliopsis granulosa [129519]	AF279415
			Gyalecta jenensis [146295]	AF465450
				AF279391
			Stictis radiata [38076]	AF356663
			Tremolecia atrata [273074]	AY533007
1921	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Symbiotaphrina buchneri [40220]	DQ248313
			Buellia aethalea [205603]	AY773927
			Buellia alboatra [116790]	AY773928
			Physcia aipolia [50936]	AY773929
			Physconia distorta [114786]	AY773930
			Physconia enteroxantha [114787]	AY773931
				AF457573
			Rinodina atrocinerea [144699]	AY773932
1923	C	cellular organisms » Eukaryota » Viridiplantae » Chlorophyta » Chlorophyceae » ...	Chlamydomonas indica [28457]	Z17228		LIT: J. Mol. Biol. 232:446-467 (1993).
2069	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Rinodina atrocinerea [144699]	AY773932
2449	N	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Symbiotaphrina buchneri [40220]	DQ248313
			Amandinea punctata [116786]	AY773934
			Buellia alboatra [116790]	AY773933
			Buellia penichra [205607]	AY773936
			Physconia enteroxantha [114787]	AY773937
			Rinodina capensis [299119]	AY773938
			Rinodina tunicata [144718]	AY773939
2499	M	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Dikarya » ...	Cryphonectria parasitica [5116]	AF068139
2585	M	cellular organisms » Eukaryota » Fungi/Metazoa group » Fungi » Chytridiomycota » ...	Rhizophydium sp. 136 [60187]	AF404306
2596	C	cellular organisms » Eukaryota » Viridiplantae » Chlorophyta » Chlorophyceae » ...	Chlamydomonas indica [28457]	Z17228		LIT: J. Mol. Biol. 232:446-467 (1993).

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