Structure File Format:     

EX RC IP L Phylogeny Organism [TaxID] Accession Structure Comment
16S IE TBD N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Exophiala prototropha
[86340]
X91899
  synonym Pullularia prototropha
X91901
  synonym Pullularia prototropha
Neonectria galligena
[56674]
Y16424
  synonym Nectria galligena
Y16423
  3' end uncertain; synonym Nectria galligena
Y16422
  synonym Nectria galligena
Graphiola phoenicis
[5276]
D63930
  IP possible 516
AB000962
   
516 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Leptodontidium quercuum
[75376]
AF056375
   
Capronia pilosella
[45095]
AY316152
   
Exophiala dermatitidis
[5970]
Z75303
   
Caliciopsis pinea
[152644]
AF242260
   
Byssochlamys zollerniae
[89138]
AY526485
   
Trichocoma paradoxa
[76771]
AB003943
   
AB003944
   
Geosmithia viridis
[106120]
AB033527
   
Penicillium argillaceum
[103783]
AB033532
   
AB033533
   
AB033531
   
Penicillium oblatum
[106126]
AB033529
   
Sagenomella diversispora
[89792]
AB024589
   
AB024588
   
Mycocalicium albonigrum
[39942]
L37736
   
Geoglossum nigritum
[107442]
AY544694
   
Pannaria conoplea
[191109]
AY424260
   
Psoroma hypnorum
[191118]
AY424261
  misannotated
Lobaria pulmonaria
[86794]
AF183935
   
Nephroma arcticum
[48859]
AY424262
  misannotated
Massalongia carnosa
[161978]
AY424265
  misannotated
Coenogonium luteum
[146297]
AF279386
  synonym Dimerella lutea
Hymenelia epulotica
[146300]
AF279393
   
Peltula umbilicata
[169193]
DQ782887
  misannotated
AF356688
  unannotated
Arthonia dispersa
[242232]
AY571379
   
Lecanactis abietina
[40113]
AY548805
   
Roccella boergesenii
[279123]
AY548807
   
Roccella canariensis
[72318]
AF110343
   
AF110345
   
AF110344
   
AF110342
   
Roccella fimbriata
[91945]
AF110339
   
Roccella tuberculata
[91947]
AF110351
   
AF110350
   
Acrospermum compressum
[152639]
AF242257
   
Delitschia didyma
[152651]
AF242264
   
Rhizoscyphus ericae
[5183]
AY762620
   
AF462168
  synonym Hymenoscyphus ericae
Rhexocercosporidium sp. DSE48.1b
[301706]
AJ864396
   
leotiomycete sp. G21-24-A14
[220855]
AY190279
   
leotiomycete sp. G21-24-A201
[220856]
AY190274
   
leotiomycete sp. G21-24-A204
[220857]
AY190275
   
leotiomycete sp. G21-24-KI129
[220858]
AY190276
   
leotiomycete sp. G21-24-PU162
[220859]
AY190277
   
leotiomycete sp. G21-24-RU19
[220860]
AY190278
   
Mycoarachis inversa
[29864]
AB012953
  str. IAM 14639
AB013735
  str. ATCC 22107
Cordyceps kanzashiana
[94210]
AB027325
   
Cordyceps prolifica
[94209]
AB027324
   
Cordyceps ramosopulvinata
[94211]
AB027326
   
Cordyceps sp. 97003
[94217]
AB027329
   
Bulbithecium hyalosporum
[95318]
AF096172
   
Hirsutella rhossiliensis
[111463]
AB109760
   
Barrmaelia oxyacanthae
[101485]
AF064048
   
Daldinia sp. F16
[246476]
AY315425
   
Xylaria sp. F23
[246502]
AY315427
   
Xylariales sp. F15
[246511]
AY315424
   
Xylariales sp. F17
[246512]
AY315426
   
Sakaguchia dacryoidea
[106023]
D13459
  was Rhodosporidium dacryoidum
Ustilentyloma fluitans
[63397]
AY124481
   
Colacogloea peniophorae
[5233]
DQ234564
   
Entyloma calendulae
[84748]
DQ663688
   
Entyloma holwayi
[63376]
DQ234562
   
Exobasidium gracile
[190086]
DQ785786
   
Tilletiopsis flava
[58914]
D82819
   
AB045703
   
Cintractia axicola
[63370]
DQ631907
   
cellular organisms »
Eukaryota »
Rhizaria »
Cercozoa »
Plasmodiophorida »
...
Plasmodiophora brassicae
[37360]
U18981
   
cellular organisms »
Eukaryota »
Viridiplantae »
Chlorophyta »
Chlorophyceae »
...
Mychonastes sp. 5C5
[178348]
AF357153
   
Pseudomuriella aurantiaca
[42696]
AB005748
  misspelling Muriella aurantica
X91268
  misspelling Muriella aurantica
Radiococcus polycoccus
[170400]
AY044650
  synonym Coenochloris polycocca
AY044649
  synonym Coenochloris polycocca
Coelastrella multistriata
[75801]
AB012846
  missing 3' end of intron -- only 50% complete
Coelastrella multistriata var. corcontica
[113518]
AB037082
   
Coelastrum pseudomicroporum
[183313]
AF388381
   
Hariotina reticulata
[183314]
AF388382
  synonym Coelastrum reticulatum
Pseudodidymocystis planctonica
[113526]
AB037087
   
Scenedesmus sp. CCMP 1625
[155396]
AF339735
   
Kirchneriella aperta
[117505]
AJ271859
   
Monoraphidium contortum
[307511]
AY846375
   
Monoraphidium terrestre
[82352]
Y17817
   
Podohedriella falcata
[52960]
X97352
  synonym Ankistrodesmus falcatus
Quadrigula closterioides
[82291]
Y17924
   
Tetraedron minimum
[302393]
AY663042
   
Botryococcus sp. UTEX 2629
[244724]
AJ581914
   
Bracteacoccus sp. BC2-1
[209073]
AF516676
   
cellular organisms »
Eukaryota »
Viridiplantae »
Chlorophyta »
Trebouxiophyceae »
...
Chlorella pyrenoidosa
[3078]
AB240151
   
Chlorella sp. 2A3
[178344]
AF357146
   
Chlorella sp. MBIC10744
[284943]
AB183634
   
Koliella spiculiformis
[154509]
AF278744
   
Amphikrikos cf. nanus Hegewald 1995-26
[120763]
AF228690
  synonym Amphikrikos sp. Hegewald 1995-26
Stichococcus bacillaris
[37433]
AB055864
   
Stichococcus sp. MBIC10457
[284983]
AB183599
   
Trebouxia arboricola
[53268]
Z68705
   
Trebouxia usneae
[53266]
Z68702
   
Actinastrum hantzschii
[55402]
AF288365
   
'Chlorella' luteoviridis
[31301]
X73997
  synonym Chlorella luteoviridis
X73998
  synonym Chlorella luteoviridis
'Chlorella' saccharophila
[3082]
AB058310
   
X73991
  synonym Chlorella saccharophila
Chlorella sp. BC4-VF9
[209072]
AF516675
   
Coccomyxa pringsheimii
[312852]
AY762603
   
Neochloris aquatica
[3099]
UNP00779
  Louise Lewis. J.Phycol. 28:375 (1992).
cellular organisms »
Eukaryota »
Viridiplantae »
Streptophyta »
Klebsormidiophyceae »
...
Klebsormidium flaccidum
[3175]
X75520
   
Klebsormidium nitens
[105231]
AJ250112
   
AF408242
  misannotated
Klebsormidium subtilissimum
[184584]
AF408241
  misannotated
568 N cellular organisms »
Eukaryota »
Viridiplantae »
Chlorophyta »
Chlorophyceae »
...
Scotiellopsis oocystiformis
[75804]
AB012848
  missing P8' to 3' end of int.
651 N cellular organisms »
Eukaryota »
Viridiplantae »
Chlorophyta »
Trebouxiophyceae »
...
Chlorella sp. AN 1-3
[221618]
AY195964
  intron in variable region near E. coli position 651
uncultured Chlorella
[254346]
AB206548
  intron in variable region near E. coli position 651
AB206547
  intron in variable region near E. coli position 651
943 N cellular organisms »
Eukaryota »
Viridiplantae »
Chlorophyta »
Trebouxiophyceae »
...
Chlorella sp. MRBG1
[335040]
AB219527
   
uncultured Chlorella
[254346]
AB206546
   
956 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Chytridiomycota »
...
Spizellomyces kniepii
[109892]
AF164238
  no 5' exon; missing 5' end of intron
989 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Exophiala nigra
[52866]
X91897
b.I1 was Nadsoniella nigra
X80707
  was Nadsoniella nigra
Paecilomyces sp. 97014
[130800]
AB044633
   
Trichoglossum hirsutum
[265104]
AY544697
   
Conotrema populorum
[56759]
U86582
   
Acrospermum compressum
[152639]
AF242257
   
Rhexocercosporidium sp. DSE48.1b
[301706]
AJ864396
   
leotiomycete sp. G21-24-KI129
[220858]
AY190276
   
leotiomycete sp. G21-24-PU162
[220859]
AY190277
   
Cordyceps kanzashiana
[94210]
AB027325
   
Cordyceps prolifica
[94209]
AB027324
   
Cordyceps ramosopulvinata
[94211]
AB027326
   
Cordyceps sp. 97003
[94217]
AB027329
   
Melanopsamma pomiformis
[80381]
AY489677
   
Thyridium vestitum
[265083]
AY544715
   
Cryptendoxyla hypophloia
[64883]
AF015912
b.I1  
Rosellinia necatrix
[77044]
AB014044
   
Xylaria polymorpha
[77046]
AB014043
   
Exobasidium gracile
[190086]
DQ785786
   
cellular organisms »
Eukaryota »
Rhodophyta »
Florideophyceae »
Hildenbrandiales »
...
Hildenbrandia rubra
[31481]
AY571893
   
1199 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Chytridiomycota »
...
Karlingiomyces sp. JEL93
[110075]
AF164278
AF164279
AF164280
   
Oedogoniomyces sp. CR84
[252682]
AY635839
   
cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Exophiala calicioides
[135514]
AB007686
  was Graphium calicioides
AB007685
  was Graphium calicioides
Paecilomyces pascua
[106128]
AB033528
   
Penicillium oblatum
[106126]
AB033529
   
Penicillium radicum
[228353]
AY256855
   
Penicillium sabulosum
[106127]
AB033530
   
Cladonia merochlorophaea
[5200]
Z14025
  Formerly Cladonia merochlorophaea Asah
Ochrolechia parella
[129506]
AF274109
   
Roccella boergesenii
[279123]
AY548807
   
Hysteropatella clavispora
[100029]
AY541483
   
Dendryphiopsis atra
[85923]
AF053731
   
Lewia infectoria
[45303]
AY154692
   
AY154690
   
AY154688
   
Sclerotinia trifoliorum
[28548]
AY187075
   
leotiomycete sp. G21-24-A201
[220856]
AY190274
   
leotiomycete sp. G21-24-A204
[220857]
AY190275
   
leotiomycete sp. G21-24-PU162
[220859]
AY190277
   
leotiomycete sp. G21-24-RU19
[220860]
AY190278
   
Bionectria ochroleuca
[29856]
AB013010
  synonyms Nectria aureofulva, Bionectria aureofulva
AB012952
  synonym Nectria ochroleuca
Hydropisphaera erubescens
[110568]
AY545722
   
Claviceps africana
[83212]
AF281176
   
Claviceps panicoidearum
[379502]
AB255605
  unannotated
AB255604
  unannotated
Claviceps sorghicola
[83213]
AF281177
   
Epichloe typhina
[5113]
AB105953
   
AB105952
   
Metarhizium flavoviride var. minus
[92631]
AF280632
   
Neotyphodium uncinatum
[5050]
AB102783
   
Paecilomyces cicadae
[181121]
AB085886
   
AB085887
   
AB085888
   
AB086630
   
AB086631
   
Tolypocladium inflatum
[29910]
AB255606
  unannotated
AB044634
   
AY245674
   
Cordyceps bassiana
[176275]
AB079125
  GenBank anamorph Beauveria bassiana
AB237657
   
AB079609
  GenBank anamorph Beauveria bassiana
Cordyceps brongniartii
[118266]
AB027335
   
AB258368
   
AB258367
   
AB237658
  unannotated
AB106649
   
Cordyceps cardinalis
[224370]
AB237660
  unannotated
Cordyceps kanzashiana
[94210]
AB027325
   
Cordyceps kyushuensis
[259534]
AY465958
   
Cordyceps militaris
[73501]
AB070373
   
AB233336
   
AB027333
   
AF327392
   
AB070374
   
AB070375
   
AB084156
   
Cordyceps prolifica
[94209]
AB027324
   
Cordyceps pruinosa
[129524]
AB044629
   
Cordyceps ramosopulvinata
[94211]
AB027326
   
Cordyceps sp. 97005
[130799]
AB044630
   
Cordyceps sp. 97009
[94216]
AB027332
   
Cordyceps sp. BCMU CN03
[343855]
AB233335
   
Cordyceps takaomontana
[131074]
AB044631
   
Torrubiella flava
[219582]
AB100609
   
Bulbithecium hyalosporum
[95318]
AF281666
   
Fusarium phaseoli
[120645]
AF150483
  GenBank synonym Fusarium solani f. sp. phaseoli
AF150481
  GenBank synonym Fusarium solani f. sp. phaseoli
Fusarium solani f. batatas
[121868]
AF150484
   
Fusarium solani f. robiniae
[121877]
AF150489
   
AF150490
   
Fusarium solani f. xanthoxyli
[121863]
AF150492
   
AF150491
   
Verticillium fungicola var. flavidum
[170723]
AB112030
   
Natantispora retorquens
[85911]
AF352086
  unannotated; synonym Halosarpheia retorquens
Graphium basitruncatum
[118975]
AB038421
   
Graphium penicillioides
[67620]
AB007682
   
Gondwanamyces proteae
[5156]
AY271804
   
Papulosa amerospora
[101488]
AF064050
   
Chaetosphaeria curvispora
[260530]
AY502933
   
Menispora tortuosa
[139972]
AY544723
   
Cryphonectria parasitica
[5116]
L42441
a.I1  
Cryphonectria radicalis
[40262]
L42442
   
Apioplagiostoma aceriferum
[148325]
AF281665
   
Leucostoma cinctum
[105485]
AF191168
   
Cryptendoxyla hypophloia
[64883]
AF281670
   
Xylaria polymorpha
[77046]
AB014043
   
Xylariales sp. F15
[246511]
AY315424
   
Xylariales sp. F17
[246512]
AY315426
   
Bensingtonia sakaguchii
[109612]
AB001747
   
AB001746
   
Bensingtonia thailandica
[119489]
AB040115
   
AB040114
   
AB040117
   
AB040116
   
Sporobolomyces taupoensis
[69980]
D66886
   
Microbotryum violaceum
[5272]
DQ789983
   
Tilletiopsis oryzicola
[132575]
AB045705
   
Exobasidium gracile
[190086]
DQ785786
   
Tilletiopsis flava
[58914]
D82819
   
AB045703
   
Cintractia sorghi-vulgaris
[293803]
DQ234548
   
1201 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Geosmithia viridis
[106120]
AB033527
  aligns well with 1199 IE introns -- error in GenBank entry?
23S IE 958 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Exobasidium gracile
[190086]
DQ663699
  misannotated
1923 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Candida albicans
[5476]
X74272
   
Candida dubliniensis
[42374]
Z70663
   
AF405231
   
1926 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Chytridiomycota »
...
Spizellomyces punctatus
[109760]
AY546692
   
cellular organisms »
Eukaryota »
Heterolobosea »
Schizopyrenida »
Vahlkampfiidae »
...
Naegleria sp.
[37103]
AJ271406
   
Naegleria sp. NG874
[159476]
AJ311176
   
cellular organisms »
Eukaryota »
Rhizaria »
Foraminifera »
Rotaliida »
...
Rotaliella elatiana
[35210]
X78521
   
cellular organisms »
Eukaryota »
stramenopiles »
Bacillariophyta »
Coscinodiscophyceae »
...
Skeletonema pseudocostatum
[41457]
Y11512
   
2066 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Symbiotaphrina buchneri
[40220]
DQ248313
   
Buellia alboatra
[116790]
AY773928
   
Physcia aipolia
[50936]
AY773929
   
Cordyceps kanzashiana
[94210]
AB044639
   
Cordyceps prolifica
[94209]
AB044640
   
Cordyceps sp. 97009
[94216]
AB044641
   
2563 N cellular organisms »
Eukaryota »
Fungi/Metazoa group »
Fungi »
Dikarya »
...
Buellia geophila
[205604]
AY787754
   
Dimelaena oreina
[116793]
AY773940
   
Rinodina capensis
[299119]
AY773938
   
Rinodina tunicata
[144718]
AY773939
   
Cordyceps brongniartii
[118266]
    LIT: Curr. Genet. 27(1):38-45 (1994).
Cordyceps kanzashiana
[94210]
AB044639
   
Cordyceps prolifica
[94209]
AB044640
   
Cordyceps sp. 97009
[94216]
AB044641
   
Gaeumannomyces graminis var. tritici
[36779]
U17160