query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Trichocoma%' AND cell_loc LIKE '%Nucleus%' AND from_gene LIKE '%16S%' AND rna_class LIKE '%IE%' AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism
Phylogeny | Genus | L | EX | RC | Org | Acc | IP | Struct. | Comment | ||
---|---|---|---|---|---|---|---|---|---|---|---|
Eukaryota | Fungi/Metazoa group | Fungi | Byssochlamys | N | 16S | IE | Byssochlamys zollerniae | AY526485 |
516 | ||
Trichocoma | N | 16S | IE | Trichocoma paradoxa | AB003944 |
516 | |||||
AB003943 |
516 | ||||||||||
Geosmithia | N | 16S | IE | Geosmithia viridis | AB033527 |
516 | |||||
1201 | aligns well with 1199 IE introns -- error in GenBank entry? | ||||||||||
Paecilomyces | N | 16S | IE | Paecilomyces pascua | AB033528 |
1199 | |||||
Paecilomyces sp. 97014 | AB044633 |
989 | |||||||||
Penicillium | N | 16S | IE | Penicillium argillaceum | AB033532 |
516 | |||||
AB033533 |
516 | ||||||||||
AB033531 |
516 | ||||||||||
Penicillium oblatum | AB033529 |
516 | |||||||||
1199 | |||||||||||
Penicillium radicum | AY256855 |
1199 | |||||||||
Penicillium sabulosum | AB033530 |
1199 | |||||||||
Sagenomella | N | 16S | IE | Sagenomella diversispora | AB024588 |
516 | |||||
AB024589 |
516 |