Table 4B: Intron Type Data [Expanded View]

query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Lecanora%' AND cell_loc LIKE '%Nucleus%' AND (from_gene = '16S' OR from_gene = '23S') AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Phylogeny			Genus	L	EX	RC	Org	Acc	IP	Comment
Eukaryota	Fungi/Metazoa group	Fungi	Biatoridium	N	16S	U	Biatoridium monasteriense	AY640988	297	spliceosomal
						U	Biatoridium monasteriense	AY640988	393	spliceosomal
						I	Biatoridium monasteriense	AY640988	934
					23S	I	Biatoridium monasteriense	AY640947	798
					23S	I	Biatoridium monasteriense	AY640947	1090
			Lopezaria	N	16S	U	Lopezaria versicolor	AY584675	299	spliceosomal
									883	spliceosomal
									1071	spliceosomal
									1229	spliceosomal
					23S	U	Lopezaria versicolor	AY584651	1093	spliceosomal
			Notolecidea	N	23S	I	Notolecidea subcontinua	AY532987	800
			Arthrorhaphis	N	16S	U	Arthrorhaphis citrinella	AF279375	265	spliceosomal
			Arthrorhaphis	N	23S	I	Arthrorhaphis citrinella	AF279376	798
			Calicium	N	23S	U	Calicium abietinum	AY452501	898	spliceosomal
							Calicium abietinum	AY452501	1092	spliceosomal
							Calicium adaequatum	AY452502	777	spliceosomal
							Calicium adaequatum	AY452503	777	spliceosomal
							Calicium denigratum	AY452505	1092	spliceosomal
							Calicium montanum	AY453635	678	spliceosomal
							Calicium quercinum	AY453636	678	spliceosomal
							Calicium quercinum	AY453636	777	spliceosomal
							Calicium tricolor	AY453637	898	spliceosomal
						I	Calicium abietinum	AY452501	1025
							Calicium adaequatum	AY452502	800
								AY452502	1094
								AY452503	800
							Calicium adspersum	AY452504	1025
							Calicium glaucellum	AY453646	800
							Calicium glaucellum	AY453646	1090
							Calicium montanum	AY453635	1025
							Calicium tricolor	AY453637	1090
					16S	U	Calicium adspersum	AF242261	297	spliceosomal
					16S	I	Calicium tricolor	L37733	392
			Cyphelium	N	23S	U	Cyphelium notarisii	AY453640	678	spliceosomal
							Cyphelium tigillare	AY453641	678	spliceosomal
								AY453641	704	spliceosomal
								AY453642	678	spliceosomal
								AY453642	704	spliceosomal
			Tholurna	N	23S	I	Tholurna dissimilis	AY453644	798
			Tholurna	N	23S	I	Tholurna dissimilis	AY453644	1025
			Cetradonia	N	16S	I	Cetradonia linearis	AY648095	114
									497
									516
									989
									1199
			Cladia	N	16S	I	Cladia retipora	U64681	989
			Cladonia	N	16S	I	Cladonia arbuscula	AY170813	1516
								AY170814	1516
								AY170817	1516
								AY170807	1516
								AY170793	1516
								AY170816	1516
								AY170815	1516
								AY170808	1516
								AY170809	1516
								AY170812	1516
								AY170811	1516
								AY170810	1516
								AY170806	1516
								AY170795	1516
								AY170794	1516
							Cladonia gracilis	AY575023	788
								AY575022	788
								AY575025	788
AY575024	788
AY575029	940
AY575028	940
AY575031	940
AY575030	940
Cladonia grayi	Z14026	1046					a.I1
Cladonia grayi	Z14026	1516					a.I1
Cladonia merochlorophaea	Z14025	1046					a.I1	Formerly Cladonia merochlorophaea Asah
		1210					a.I1	Formerly Cladonia merochlorophaea Asah
		1389					a.I1	Formerly Cladonia merochlorophaea Asah
		1516					a.I1	Formerly Cladonia merochlorophaea Asah
Cladonia mitis	AY170799	1516
	AY170798	1516
	AY170818	1516
	AY170797	1516
	AY170796	1516
	AY170820	1516
	AY170819	1516
	AY170804	1516
	AY170803	1516
	AY170802	1516
	AY170801	1516
	AY170800	1516
	AY170805	1516
Cladonia rangiferina	AY575026	788
	AY575027	788
	AY575034	940
	AY575032	940
	AY575033	940
U	Cladonia bellidiflora	U64682				330		spliceosomal
	Cladonia caroliniana	AY584664				330		spliceosomal
	Cladonia diversa	U64683				330		spliceosomal
	Cladonia portentosa	U64684				330		spliceosomal; synonym Cladina portentosa
IE	Cladonia merochlorophaea	Z14025				1199		Formerly Cladonia merochlorophaea Asah
23S	I	Cladonia caroliniana			AY584640	798
23S	I	Cladonia rangiferina			AY533000	1025
Gymnoderma	N	16S	I	Gymnoderma coccocarpum	AF523362	114
						497		intron in variable region ca. E. coli position 497
						516
						788
						1046
						1199
						1210
			U	Gymnoderma coccocarpum	AF523362	1231		spliceosomal
Crocynia	N	16S	U	Crocynia pyxinoides	AY584677	1229		spliceosomal
Lecanora	N	16S	I	Lecanora allophana		940		LIT: Curr. Genet. 35(5):536-541 (1999).
				Lecanora dispersa	L37734	114	a.I1
						287	a.I1
						516	a.I1
						789	a.I1
						1046	a.I1
						1210	a.I1
						1516	a.I1
			U	Lecanora hybocarpa	DQ782883	330
		23S	I	Lecanora cenisia	AY532992	1025
				Lecanora cenisia	AY532992	1094
				Lecanora concolor	AY640954	1025
				Lecanora hybocarpa	DQ782910	1090
			U	Lecanora hybocarpa	DQ782910	678		spliceosomal
			U	Lecanora hybocarpa	DQ782910	776		spliceosomal
Rhizoplaca	N	16S	I	Rhizoplaca chrysoleuca	AY530888	114
						287
						788
						940
						1210
					AY530881	940
					AY530881	1210
					AY530880	940
					AY530880	1210
					AY530879	940
					AY530879	1210
					AY530882	940
					AY530882	1210
					AY509793	1516
					AY509794	1516
					AY509792	1516
					AY509795	1516
					AY509796	1516
				Rhizoplaca huashanensis	AY530885	114
						287
						516
						1516
				Rhizoplaca melanophthalma	AY509791	1516
				Rhizoplaca peltata	AY530887	516
				Rhizoplaca peltata	AY530887	940
				Rhizoplaca subdiscrepans	AY509804	1516
					AY509789	1516
					AY509805	1516
			U	Rhizoplaca chrysoleuca	AY530884	1229		spliceosomal
					AY530883	1229		spliceosomal
					AY530879	1229		spliceosomal
					AY530882	1229		spliceosomal
					AY530880	1229		spliceosomal
					AY530881	1229		spliceosomal
		23S	I	Rhizoplaca chrysoleuca	AY648104	798
				Rhizoplaca chrysoleuca	AY648104	1090
				Rhizoplaca huashanensis	AY648105	798
				Rhizoplaca huashanensis	AY648105	1094
Scoliciosporum	N	16S	I	Scoliciosporum umbrinum	AY641006	287
		16S	I	Scoliciosporum umbrinum	AY641006	516
		23S	I	Scoliciosporum umbrinum	AY640967	1090
Strangospora	N	16S	I	Strangospora pinicola	AY641011	788
					AY641011	935
					AY641010	788
					AY641010	935
		23S	I	Strangospora pinicola	AY640971	1025
		23S	I	Strangospora pinicola	AY640970	1025
Hypocenomyce	N	23S	I	Hypocenomyce scalaris	DQ782914	800
Mycoblastus	N	16S	U	Mycoblastus sanguinarius	DQ782879	674		spliceosomal
			U	Mycoblastus sanguinarius	DQ782879	1229		spliceosomal
			I	Mycoblastus sanguinarius	DQ782879	940
						1199		misannotated
						1389
		23S	U	Mycoblastus sanguinarius	DQ782915	678		spliceosomal
			I	Mycoblastus sanguinarius	DQ782915	1025
			I	Mycoblastus sanguinarius	DQ782915	1090
Ahtiana	N	16S	I	Ahtiana sphaerosporella	AF141859	1516
Arctocetraria	N	16S	I	Arctocetraria nigricascens	AF254628	1516
Asahinea	N	16S	I	Asahinea chrysantha	AF451766	1516
Asahinea	N	16S	I	Asahinea chrysantha	AF451767	1516
Bryoria	N	16S	I	Bryoria fuscescens	AF451736	1516
Cavernularia	N	16S	I	Cavernularia lophyrea	AF115757	1516		possibly IP 1521
Cavernularia	N	16S	I	Cavernularia lophyrea	AF141367	1516		possibly IP 1521
Cetraria	N	16S	I	Cetraria arenaria	AF115758	1516		possibly IP 1521
				Cetraria islandica	AF139035	0		IP 1516? (possibly 1521)
						940		LIT: Curr. Genet. 35(5):536-541 (1999).
					AF072225	1516		possibly IP 1521
				Cetraria nigricans	AF254630	1516
				Cetraria nigricans	AF254629	1516
				Cetraria odontella	AF228303	1516
					AF228285	1516
					AF228304	1516
Cetraria ericetorum	N	16S	I	Cetraria ericetorum subsp. ericetorum	AF139033	0		IP 1516? (possibly 1521)
				Cetraria ericetorum subsp. ericetorum	AF228290	1516		possibly IP 1521
				Cetraria ericetorum subsp. reticulata	AF139034	0		IP 1516? (possibly 1521)
Cetraria islandica	N	16S	I	Cetraria islandica subsp. antarctica	AF228293	1516
				Cetraria islandica subsp. antarctica	AF254627	1516
				Cetraria islandica subsp. crispiformis	AF228295	1516
				Cetraria islandica subsp. crispiformis	AF228294	1516
				Cetraria islandica subsp. islandica	AF228297	1516
					AF228298	1516
					AF228296	1516
					AF228299	1516
Dactylina	N	16S	I	Dactylina arctica	AF115760	1516		possibly IP 1521
Flavoparmelia	N	16S	I	Flavoparmelia caperata	AY584663	788
			I	Flavoparmelia caperata	AY584663	943
			U	Flavoparmelia caperata	AY584663	1229		spliceosomal
		23S	U	Flavoparmelia caperata	AY584639	678		spliceosomal
		23S	U	Flavoparmelia caperata	AY584639	775		spliceosomal
Hypogymnia	N	16S	I	Hypogymnia physodes		940		LIT: Curr. Genet. 35(5):536-541 (1999).
					AF115761	1516		possibly IP 1521
					AF141368	1516		possibly IP 1521
Letharia	N	16S	I	Letharia columbiana	AF221063	287
Melanelia	N	23S	U	Melanelia disjuncta	AJ421431	678		spliceosomal
			I	Melanelia disjuncta	AJ421431	1090
			I	Melanelia stygia	AJ421434	1094
		16S	I	Melanelia hepatizon	AF141369	1516		possibly IP 1521
Melanelixia	N	23S	U	Melanelixia fuliginosa	AJ421428	678		spliceosomal; synonym: Melanelia fuliginosa
			U	Melanelixia glabra	AJ421427	784		spliceosomal; synonym: Melanelia glabra
			I	Melanelixia fuliginosa	AJ421428	798		synonym: Melanelia fuliginosa
					AJ421428	1025		synonym: Melanelia fuliginosa
					AJ421435	1025		synonym: Melanelia fuliginosa
Melanohalea	N	23S	I	Melanohalea elegantula	AJ421437	1025		synonym: Melanelia elegantula
				Melanohalea elegantula	AJ421437	1090		synonym: Melanelia elegantula
				Melanohalea exasperata	AJ421438	1025		synonym: Melanelia exasperata
				Melanohalea exasperatula	AJ421436	1025		synonym: Melanelia exasperatula
				Melanohalea exasperatula	AJ421436	1090		synonym: Melanelia exasperatula
Menegazzia	N	23S	U	Menegazzia terebrata	AY584637	678		spliceosomal
Nephromopsis	N	16S	I	Nephromopsis ahtii	AF404123	1516		5' exon not present; genbank synonym: Tuckneraria ahtii
				Nephromopsis komarovii	AF451779	1516
				Nephromopsis laureri	AF451786	1516		genbank synonym: Tuckneraria laureri
				Nephromopsis stracheyi	AF451785	1516
Parmelia	N	16S	I	Parmelia ernstiae	AF412310	1516
				Parmelia ernstiae	AF412309	1516
				Parmelia saxatilis		940		LIT: Curr. Genet. 35(5):536-541 (1999).
					AF451772	1516
					AF141370	1516		possibly IP 1521
					AF410835	1516
					AF410836	1516
					AF451770	1516
					AF410837	1516
					AF451771	1516
Parmotrema	N	16S	U	Parmotrema tinctorum	AY584659	265		spliceosomal
			U	Parmotrema tinctorum	AY584659	299		spliceosomal
			I	Parmotrema tinctorum	AY584659	497		intron in variable region ca. E. coli position 497
						516
						943
						1046
		23S	U	Parmotrema tinctorum	AY584635	678		spliceosomal
			U	Parmotrema tinctorum	AY584635	784		spliceosomal
			I	Parmotrema tinctorum	AY584635	1090
Pseudephebe	N	16S	I	Pseudephebe pubescens	AF451738	1516
Punctelia	N	16S	U	Punctelia hypoleucites	AY584670	1229		spliceosomal
		16S	U	Punctelia rudecta	AY584660	1229		spliceosomal
		23S	U	Punctelia hypoleucites	AY584646	678		spliceosomal
		23S	U	Punctelia rudecta	AY584636	678		spliceosomal
Usnea	N	16S	I	Usnea filipendula		940		LIT: Curr. Genet. 35(5):536-541 (1999).
				Usnea hirta		940		LIT: Curr. Genet. 35(5):536-541 (1999).
				Usnea rigida		940		LIT: Curr. Genet. 35(5):536-541 (1999).
				Usnea subfloridana		940		LIT: Curr. Genet. 35(5):536-541 (1999).
Vulpicida	N	16S	I	Vulpicida juniperina		940		LIT: Curr. Genet. 35(5):536-541 (1999).
				Vulpicida pinastri	AF072239	1516		possibly IP 1521
				Vulpicida pinastri	AF139031	1516		IP 1516? (possibly 1521)
Xanthoparmelia	N	16S	U	Xanthoparmelia conspersa	AY584665	1229		spliceosomal
		16S	I	Xanthoparmelia semiviridis	AF451746	1516		synonym Chondropsis semiviridis
		23S	U	Xanthoparmelia pulla	AJ421433	678		synonym Neofuscelia pulla; spliceosomal
		23S	I	Xanthoparmelia pulla	AJ421433	1090		synonym Neofuscelia pulla
Amandinea	N	16S	I	Amandinea punctata	AJ549800	788
		16S	I	Amandinea punctata	AJ549800	1049
		23S	I	Amandinea punctata	AY773918	1094
		23S	I	Amandinea punctata	AY773934	2449
Anaptychia	N	23S	U	Anaptychia runcinata	AY773919	777		spliceosomal; unannotated
Anaptychia	N	23S	I	Anaptychia runcinata	AY773919	1094
Buellia	N	16S	I	Buellia aethalea	AJ549801	114
						788
						1516
		23S	I	Buellia aethalea	AY773927	1921
				Buellia alboatra	AY773915	1090
					AY773928	1921
					AY773933	2449
				Buellia geophila	AY773917	779
						1025
						1090
				Buellia griseovirens	AY773910	779
						798
						1025
				Buellia muriformis	AY773925	1025
				Buellia penichra	AY773936	2449
			IE	Buellia alboatra	AY773928	2066
			IE	Buellia geophila	AY787754	2563
			U	Buellia capitis-regum	AF457572	1929		spliceosomal
			U	Buellia muriformis	AF457571	2076		spliceosomal
Dimelaena	N	23S	IE	Dimelaena oreina	AY773940	2563
Diplotomma	N	16S	I	Diplotomma alboatrum	AJ549802	287
						300
						497		intron in variable region ca E.coli position 497
						516
						788
						940
						1199
						1210
						1516
				Diplotomma epipolium	AJ506969	287
						300
						516
						788
						940
						1199
						1210
						1516
		23S	I	Diplotomma alboatrum	AY452500	779
				Diplotomma alboatrum	AY452500	1090
				Diplotomma epipolium	AY773916	779
				Diplotomma epipolium	AY773916	1090
Hyperphyscia	N	16S	U	Hyperphyscia adglutinata	AJ549803	265		spliceosomal
			U	Hyperphyscia adglutinata	AJ549803	300		spliceosomal
			I	Hyperphyscia adglutinata	AJ549803	287
						516
						940
						1049
						1210
						1516
Phaeophyscia	N	16S	I	Phaeophyscia ciliata	AF224457	1506
					AF224457	1516
					AF224455	1506
					AF224455	1516
					AF224456	1506
					AF224456	1516
					AF224447	1506
					AF224447	1516
					AF224448	1506
					AF224448	1516
					AF224354	1506
					AF224354	1516
					AF224454	1506
					AF224454	1516
					AF224450	1506
					AF224450	1516
				Phaeophyscia constipata	AF224374	1506
				Phaeophyscia constipata	AF224374	1516
				Phaeophyscia endococcina	AF224444	1506
				Phaeophyscia endophoenicea	AF224445	1506
				Phaeophyscia hispidula	AY648103	287
						788
						1199
						1210
						1384
					AY303138	1506		5' end of intron missing from GB entry
					AY303138	1516
				Phaeophyscia nigricans	AF224375	1516
				Phaeophyscia orbicularis	AJ549804	114
						287
						299
					AJ549805	788
						943
						1199
						1210
						1384
						1506
						1516
					AF224460	1506
					AF224460	1516
					AF224459	1506
					AF224459	1516
					AF224458	1506
					AF224458	1516
					AF224453	1506
					AF224453	1516
					AF224451	1506
					AF224451	1516
					AF224452	1506
					AF224452	1516
					AF224449	1506
					AF224449	1516
				Phaeophyscia sciastra	AF224446	1506
			U	Phaeophyscia orbicularis	AJ549804	331		spliceosomal
		23S	I	Phaeophyscia orbicularis	AY773926	1090
Physcia	N	16S	I	Physcia adscendens	AF224422	1516
					AF224423	1516
					AF224430	1516
				Physcia aipolia	AY648096	114
						516
						788
						943
					AY648097	114
						516
						788
						943
					AY648101	516
						788
						943
					DQ782876	516
					DQ782876	788
					AY648099	788
						1049
						1199
						1210
					AF224432	1516
					AF224393	1516
					AF224396	1516
					AF224398	1516
					AF224392	1516
					AF224394	1516
					AY303135	1516
					AF224397	1516
					AY303136	1516
					AF224390	1516
					AF224391	1516
					AF224395	1516
					AY303133	1516
					AF224383	1516
					AY303132	1516
					AF224431	1516
				Physcia albinea	AF224433	1516
				Physcia alnophila	AF224434	1516
					AF224381	1516
					AF224380	1516
					AF224382	1516
				Physcia biziana	AF224417	1516
				Physcia caesia	AY648098	114
						516
						788
						1210
					AY648100	516
						788
						943
						1049
						1210
					AF224385	1516
					AF224437	1516
					AF224388	1516
					AF224387	1516
					AF224379	1516
					AF224389	1516
					AY303134	1516
					AY303131	1516
					AF224384	1516
					AF224435	1516
					AF224438	1516
					AF224386	1516
					AF224436	1516
AY498690	1516
Physcia dimidiata	AJ506970	516
	AJ506970	788
	AJ506970 AJ507615	1199		implicit from annotations
	AJ507615	1210
Physcia dubia	AF224401	1516
	AF224399	1516
	AF224420	1516
	AF224419	1516
	AF224418	1516
	AF224403	1516
	AF224402	1516
	AF224400	1516
	AF224439	1516
	AF224440	1516
	AF224413	1516
	AF224412	1516
	AF224411	1516
	AF224421	1516
Physcia leptalea	AF224441	1516
	AF224428	1516
	AF224429	1516
Physcia magnussonii	AF224376	1516
Physcia magnussonii	AF224377	1516
Physcia phaea	AF224378	1516
Physcia stellaris	AY648102	516
		788
		1049
		1210
	AY303137	1516
	AY498689	1516
	AF224406	1516
	AF224404	1516
	AF224405	1516
	AF224407	1516
	AF224442	1516
	AF224409	1516
	AF224408	1516
	AF224410	1516
Physcia undulata	AJ549806	114
		516
		788
		1389
		1506
		1516
U	Physcia aipolia	U64686	330		spliceosomal
	Physcia undulata	AJ549806	299		spliceosomal
			393		spliceosomal
			674		spliceosomal
			883		spliceosomal
			939		spliceosomal
23S	U	Physcia aipolia	AY773914	678		spliceosomal
				1054		spliceosomal
				1092		spliceosomal
			AY773929	1903		spliceosomal
			AY773929	1929		spliceosomal; unannotated
	I	Physcia aipolia	AY773914	779
			AY773914	798
			DQ782904	1090
			AY773929	1921
		Physcia stellaris	AY773912	779
				798
				1094
		Physcia tenella	AY773908	779
				798
				1094
	IE	Physcia aipolia	AY773929	2066
Physcia dimidiata	N	16S	I	Physcia dimidiata var. dimidiata	AF224415	1516
				Physcia dimidiata var. dimidiata	AF224416	1516
				Physcia dimidiata var. ornata	AF224414	1516
Physcia tenella	N	16S	I	Physcia tenella var. marina	AF224426	1516
				Physcia tenella var. marina	AF224424	1516
				Physcia tenella var. tenella	AF224425	1516
				Physcia tenella var. tenella	AF224427	1516
Physconia	N	16S	U	Physconia detersa	AJ240485	297		spliceosomal
					AJ240492	331		spliceosomal
					AJ240495	674		spliceosomal
					AJ240498	883		spliceosomal
					AJ240504	939		spliceosomal
					AJ240509	1229		spliceosomal
				Physconia distorta	AJ240484	297		spliceosomal
					AJ240491	331		spliceosomal
					AJ240494	674		spliceosomal
					AJ240497	883		spliceosomal
					AJ240502	939		spliceosomal
					AJ240508	1229		spliceosomal
				Physconia elegantula	AJ240487	298		spliceosomal
					AJ240489	331		spliceosomal
					AJ240501	939		spliceosomal
					AJ240507	1229		spliceosomal
				Physconia enteroxantha	AJ240486	297		spliceosomal
				Physconia grisea	AJ240503	939		spliceosomal
				Physconia kurokawae	AJ240496	674		spliceosomal
					AJ240499	883		spliceosomal
					AJ240505	939		spliceosomal
					AJ240510	1229		spliceosomal
				Physconia perisidiosa	AJ240488	298		spliceosomal
					AJ240490	331		spliceosomal
					AJ240512	1229		spliceosomal
				Physconia venusta	AJ240500	883		spliceosomal
					AJ240506	939		spliceosomal
					AJ240511	1229		spliceosomal
		23S	I	Physconia distorta	AY773913	798
						1025
						1094
					AY773930	1921
				Physconia enteroxantha	AY773909	779
						798
						1025
					AY773931	1921
					AF457573	1921
					AY773937	2449
				Physconia grisea	AY773921	779
						1025
						1094
				Physconia perisidiosa	AY773911	798
				Physconia perisidiosa	AY773911	1094
			U	Physconia enteroxantha	AY773931	1903		spliceosomal
			U	Physconia enteroxantha	AF457573	1903		spliceosomal
Rinodina	N	23S	I	Rinodina atrocinerea	AY773923	779
					AY773923	1094
					AY773932	1921
					AY773932	2069
				Rinodina capensis	AY773924	779
					AY773924	1025
					AY773938	2449
				Rinodina milvina	AY773922	779
						1025
						1094
				Rinodina tunicata	AF457568	800
					AY773920	800
						1025
						1094
					AF457569	1094
					AY773939	2449
			IE	Rinodina capensis	AY773938	2563
			IE	Rinodina tunicata	AY773939	2563
			U	Rinodina tunicata	AF457568	777		spliceosomal
					AY773920	777		spliceosomal
					AY773920	1054		spliceosomal; misannotated
					AF457569	1054		spliceosomal
		16S	I	Rinodina gennarii	AJ549808	287
						943
						1516
				Rinodina oxydata	AJ506971	114
						497
						516
						940
						1199
						1389
						1516
Tornabea	N	16S	I	Tornabea scutellifera	AJ549810	788
						943
						1199
						1516
Bellemerea	N	23S	U	Bellemerea subsorediza	AY532983	784		spliceosomal
Immersaria	N	23S	I	Immersaria usbekica	AY532985	1090
Koerberiella	N	23S	I	Koerberiella wimmeriana	AY532986	798
Porpidia	N	23S	I	Porpidia albocaerulescens	AF356676	1025
				Porpidia albocaerulescens	AY532938	1025
				Porpidia carlottiana	AY532940	1090
		16S	U	Porpidia crustulata	L37735	514		spliceosomal
Porpidia albocaerulescens	N	23S	I	Porpidia albocaerulescens var. polycarpiza	AY532937	1025
Protoblastenia	N	16S	I	Protoblastenia calva	AY548822	788
				Protoblastenia calva	AY548821	788
				Protoblastenia calvella	AY425646	1210
				Protoblastenia calvella	AY425647	1210
				Protoblastenia laeta	AY425650	1210
					AY425651	1210
					AY425652	1210
					AY425653	1210
					AY548818	1210
				Protoblastenia lilacina	AY425629	1210
				Protoblastenia rupestris	AY548820	788
				Protoblastenia siebenhaariana	AY425627	1199
			U	Protoblastenia siebenhaariana	AY425627	1229		spliceosomal
		23S	I	Protoblastenia rupestris	AY533008	798
		23S	I	Protoblastenia rupestris	AY533008	1025
Psora	N	16S	U	Psora crenata	AY425634	1229		spliceosomal
Bacidia	N	23S	U	Bacidia rosella	AY300829	776		spliceosomal
			U	Bacidia schweinitzii	DQ782911	1098		spliceosomal
			I	Bacidia rosella	AY300829	798
			I	Bacidia schweinitzii	DQ782911	798
		16S	U	Bacidia schweinitzii	DQ782884	265		spliceosomal
						299		spliceosomal
						330		spliceosomal
			I	Bacidia schweinitzii	DQ782884	287
						497		intron in variable region ca. E. coli position 497
						516
Biatora	N	16S	I	Biatora efflorescens	AJ247554	1516
				Biatora fallax	AJ247526	1516
					AJ247527	1516
					AJ247548	1516
				Biatora helvola	AJ247547	1516
					AJ247546	1516
					AJ247518	1516
					AJ247543	1516
					AJ247549	1516
					AJ247514	1516
					AJ247516	1516
					AJ247556	1516
					AJ247557	1516
					AJ247517	1516
					AJ247515	1516
					AJ247541	1516
					AJ247544	1516
					AJ247545	1516
					AJ247542	1516
					AJ247550	1516
				Biatora ocelliformis	AJ247520	1516
				Biatora ocelliformis	AJ247521	1516
				Biatora pseudohelvola	AJ247570	1516
					AJ247558	1516
					AJ247572	1516
					AJ247571	1516
				Biatora sphaeroidiza	AJ247553	1516
					AJ247551	1516
					AJ247552	1516
				Biatora toensbergii	AJ247519	1516
Stereocaulon	N	16S	U	Stereocaulon paschale	AF279412	330		spliceosomal
				Stereocaulon taeniarum	U64687	330		spliceosomal
				Stereocaulon tomentosum	U64688	330		spliceosomal

Comparative RNA Web Site and Project The Gutell Lab

Table 4B: Intron Type Data [Expanded View]