query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Trichocoma%' AND cell_loc LIKE '%Nucleus%' AND (from_gene = '16S' OR from_gene = '23S') AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Table 4B View:    

Structure File Format:     

Phylogeny Genus L EX RC Org Acc IP Struct. Comment
Eukaryota Fungi/Metazoa group Fungi Byssochlamys N 16S IC1 Byssochlamys fulva AY526482
943    
AB023941
943    
Byssochlamys zollerniae AB023940
943    
AY526485
943    
IE Byssochlamys zollerniae AY526485
516    
Byssochlamys spectabilis N 16S IC1 Paecilomyces variotii Z69593
0    
AB023946
943    
Penicilliopsis N 16S IC1 Penicilliopsis clavariiformis AB003945
943 a.I1  
Talaromyces N 16S IC1 Talaromyces wortmannii AY157634
1511    
Trichocoma N 16S IE Trichocoma paradoxa AB003943
516    
AB003944
516    
Geosmithia N 16S U Geosmithia argillacea AB032116
AB032117
516    
AB032117
AB032118
943    
AB032108
AB032109
516    
AB032109
AB032110
943    
AB032110
AB032111
1506    
AB032112
AB032113
516    
AB032113
AB032114
943    
AB032114
AB032115
AB032118
AB032119
1506    
IC1 Geosmithia argillacea AB013733
943   str. IFO 31128
AB013734
1512   str. IFO 31128
AB012951
943   str. IAM14726
1512   str. IAM14726
Geosmithia viridis AB033527
788    
943    
1506    
IE Geosmithia viridis AB033527
516    
1201   aligns well with 1199 IE introns -- error in GenBank entry?
Paecilomyces N 16S IC1 Paecilomyces pascua AB033528
943    
1506    
IE Paecilomyces pascua AB033528
1199    
Paecilomyces sp. 97014 AB044633
989    
Penicillium N 16S IE Penicillium argillaceum AB033532
516    
AB033533
516    
AB033531
516    
Penicillium oblatum AB033529
516    
1199    
Penicillium radicum AY256855
1199    
Penicillium sabulosum AB033530
1199    
IC1 Penicillium argillaceum AB033531
943    
1506    
AB033532
943    
1506    
AB033533
943    
1506    
Penicillium oblatum AB033529
788    
943    
1506    
Penicillium ochrochloron AF178516
1511    
Penicillium pulvillorum AF178527
1511    
AF178526
1511    
AF178517
1511    
Penicillium radicum AY256855
788    
Penicillium sabulosum AB033530
788    
943    
1506    
U Penicillium sabulosum AB033530
516    
Sagenomella N 16S IE Sagenomella diversispora AB024588
516    
AB024589
516    
IC1 Sagenomella griseoviridis AB024590
943