query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Archaea%' AND (from_gene = '16S' OR from_gene = '23S') AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Table 4B View:    

Structure File Format:     

Phylogeny Genus L EX RC Org Acc IP Struct. Comment
Archaea Crenarchaeota Thermoprotei Aeropyrum N 16S U Aeropyrum camini AB109559
908   Archaeal
1068   Archaeal
Aeropyrum pernix AP000062
908   Archaeal; replaces AB008745; strain:K1
AB078017
908   Archaeal
1068   Archaeal
AB078018
908   Archaeal
1068   Archaeal
AB078019
908   Archaeal
1068   Archaeal
AB078020
908   Archaeal
1068   Archaeal
AB078021
908   Archaeal
1068   Archaeal
AB078022
908   Archaeal
1068   Archaeal
AB019553
908   Archaeal; strain:TB1
1068   Archaeal; strain:TB1
AB019554
908   Archaeal; strain:TB7
1068   Archaeal; strain:TB7
23S U Aeropyrum pernix AB078020
1085   Archaeal
1927   Archaeal
AB019553
1085   Archaeal; strain:TB1
AB078022
1085   Archaeal
AP000062
1085   Archaeal; replaces AB008745; strain:K1
1927   Archaeal; replaces AB008745; strain:K1
AB078021
1085   Archaeal
1927   Archaeal
AB078019
1085   Archaeal
1927   Archaeal
AB078018
1085   Archaeal
AB078017
1085   Archaeal
AB019554
1085   Archaeal; strain:TB7
1927   Archaeal; strain:TB7
Desulfurococcus N 23S U Desulfurococcus mobilis X03263
1952   Archaeal
Staphylothermus N 23S U Staphylothermus marinus M86623
1927   Archaeal
2601   Archaeal
M38363
1927   Archaeal
2601   Archaeal
Caldivirga N 16S U Caldivirga maquilingensis AB013926
901   Archaeal
908   Archaeal
23S U Caldivirga maquilingensis AB178785
471   Archaeal
Pyrobaculum N 16S U Pyrobaculum aerophilum L07510
374   Archaeal
AE009843
374   Archaeal
Pyrobaculum oguniense AB087402
1205   Archaeal
1213   Archaeal
23S U Pyrobaculum organotrophum   1809   Archaeal; LIT: Gene 121(1):103-110 (1992).
  2552   Archaeal; LIT: Gene 121(1):103-110 (1992).
Pyrobaculum sp. 14b AB178787
1952   Archaeal
Pyrobaculum sp. M0H AB178786
1927   Archaeal
2409   Archaeal
Pyrobaculum sp. M1T AB178788
323   Archaeal
471   Archaeal
1699   Archaeal
2409   Archaeal
Thermoproteus N 16S U Thermoproteus neutrophilus AB009618
1205   Archaeal
1213   Archaeal
Thermoproteus sp. IC-033 AB009616
548   Archaeal
781   Archaeal
1092   Archaeal
1205   Archaeal
1213   Archaeal
Thermoproteus sp. IC-061 AB009617
781   Archaeal
1205   Archaeal
1213   Archaeal
AB081846
1205   Archaeal
1213   Archaeal
23S U Thermoproteus neutrophilus AB178792
1809   Archaeal
Thermoproteus sp. IC-031 AB178782
323   Archaeal
1699   Archaeal
1809   Archaeal
1952   Archaeal
2409   Archaeal
Thermoproteus sp. IC-033 AB178781
323   Archaeal
1699   Archaeal
1809   Archaeal
2409   Archaeal
Thermoproteus sp. IC-061 AB178789
323   Archaeal
1952   Archaeal
Thermoproteus sp. IC-070 AB178791
323   Archaeal
1699   Archaeal
1809   Archaeal
2409   Archaeal
Vulcanisaeta N 16S U Vulcanisaeta distributa AB063639
1391   Archaeal
23S U Vulcanisaeta distributa AB178784
1809   Archaeal
2534   Archaeal
AB178783
1927   Archaeal
Euryarchaeota environmental samples environmental samples N 16S U uncultured euryarchaeote DQ848677
1101    
AY652726
1101   Archaeal
environmental samples uncultured archaeon SAGMA-17 environmental samples N 16S U uncultured archaeon SAGMA-17 AB050247
322   Archaeal
uncultured archaeon SAGMA-B environmental samples N 16S U uncultured archaeon SAGMA-B AB050206
263   Archaeal
532   Archaeal
908   Archaeal
1363   Archaeal
uncultured archaeon pHGPA13 environmental samples N 16S U uncultured archaeon pHGPA13 AB027540
781   Archaeal
901   Archaeal
908   Archaeal
1205   Archaeal
1213   Archaeal
uncultured archaeon pHGPA1 environmental samples N 16S U uncultured archaeon pHGPA1 AB027539
781   Archaeal
1205   Archaeal
1213   Archaeal
uncultured archaeon environmental samples N 16S U uncultured archaeon AB109879
162   Archaeal
AB109884
162   Archaeal
DQ490015
374   Archaeal
687   Archaeal
801   Archaeal
AB109878
932   Archaeal