query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Bacillariophyta%' AND (from_gene = '16S' OR from_gene = '23S') AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism
Phylogeny | Genus | L | EX | RC | Org | Acc | IP | Struct. | Comment | ||
---|---|---|---|---|---|---|---|---|---|---|---|
Eukaryota | stramenopiles | Bacillariophyta | Amphiprora | N | 16S | U | Amphiprora paludosa | AY485468 |
939 | spliceosomal | |
Amphora | N | 16S | U | Amphora coffeaeformis | AY485498 |
510 | spliceosomal | ||||
939 | spliceosomal | ||||||||||
Leptocylindrus | N | 16S | IC1 | Leptocylindrus danicus | AY485501 |
943 | |||||
Cymatosira | N | 16S | U | Cymatosira belgica | X85387 |
742 | spliceosomal | ||||
939 | spliceosomal | ||||||||||
1197 | spliceosomal | ||||||||||
Extubocellulus | N | 16S | U | Extubocellulus spinifer | AY485504 |
742 | spliceosomal | ||||
939 | spliceosomal | ||||||||||
1197 | spliceosomal | ||||||||||
Skeletonema | N | 23S | IE | Skeletonema pseudocostatum | Y11512 |
1926 | |||||
Nanofrustulum | N | 16S | U | Nanofrustulum shiloi | AY485505 |
510 | spliceosomal | ||||
unclassified diatoms | N | 16S | U | Heterostegina depressa diatom endosymbiont | AM233868 |
401 | spliceosomal | ||||
894 | spliceosomal | ||||||||||
AM233869 |
401 | spliceosomal | |||||||||
894 | spliceosomal | ||||||||||
AM233870 |
651 | spliceosomal; in variable region ca. E. coli position 651 | |||||||||
742 | spliceosomal | ||||||||||
813 | spliceosomal | ||||||||||
894 | spliceosomal | ||||||||||
939 | spliceosomal | ||||||||||
AM233871 |
813 | spliceosomal | |||||||||
894 | spliceosomal |