query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Bangia%' AND cell_loc LIKE '%Nucleus%' AND from_gene LIKE '%16S%' AND rna_class LIKE '%IC1%' AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Table 4B View:    

Structure File Format:     

Phylogeny Genus L EX RC Org Acc IP Struct. Comment
Eukaryota Rhodophyta Bangiophyceae Bangia N 16S IC1 Bangia atropurpurea AB053491
516    
AF172565
516   England River Thames/BI12; exon sequence from AF043365
AF172563
516   Ireland/IR; exon sequence from AF043365
AF172562
516   Netherlands/NL: Ysselmeer; exon sequence from AF169341
AF172566
516   Great Lakes/GL; exon sequence from AF043365
AF172564
516   Italy/IT; exon sequence from AF043365
D88387
516 b.I1  
1506    
L36066
1506    
Bangia fuscopurpurea AF172569
516   Ireland/IR; exon sequence from AF175534
AF172593
1506   Ireland/IR; exon sequence from AF175534
AF172568
516   California/CA; exon sequence from AF043356
AF172590
1506   California/CA; exon sequence from AF043356
AF172567
516   Victoria/BC2; exon sequence from AF043359
AF172591
1506   Victoria/BC2; exon sequence from AF043359
AF172572
516 b.I1 Oregon/OR; exon sequence from AF043358
AF172589
1506   Oregon/OR; exon sequence from AF043358
AF342745
516 b.I1  
1506    
AF172560
516   Germany: Helgoland/HL; exon sequence from AF175532
AF172585
1506   Germany: Helgoland/HL; exon sequence from AF175532
AF172561
516   Massachusetts/MA; exon sequence from AF043362
AF172571
516   Nova Scotia/NS; exon sequence from AF169337
AF172594
1506   Nova Scotia/NS; exon sequence from AF169337
AB053489
516    
AB053488
516    
AF172570
516   Newfoundland/NF; exon sequence from AF043357
AF172592
1506   Newfoundland/NF; exon sequence from AF043357
AF172558
516   Greece/GR; exon sequence from AF175533
AF172587
1506   Greece/GR; exon sequence from AF175533
AF172559
516   North Carolina/NC; exon sequence from AF043363
AF172586
1506   North Carolina/NC; exon sequence from AF043363
AF172555
516   New Jersey/NJ; exon sequence from AF169335
AF172583
1506   New Jersey/NJ; exon sequence from AF169335
AF172556
516   France: Nice; exon sequence from AF175535
AF172584
1506   France: Nice; exon sequence from AF175535
AF172557
516 b.I1 Australia/AU; exon sequence from AF175531
AF172582
1506   Mexico/MEX; exon sequence from AF169334
Bangia sp. strain BDS725 AY184337
516    
Bangia sp. strain BGA458 AY184341
516    
Bangia sp. strain BNS727 AY184345
516    
Bangia sp. strain BWP662 AY184348
516    
Bangia sp. AF172578
516 b.I1 Virgin Islands/VIS7; exon sequence from AF043364
Porphyra N 16S IC1 Porphyra capensis AY766361
516    
1506    
Porphyra cinnamomea AF136418
AF136419
516    
AF136419
1506    
Porphyra dentata AB013183
516    
1506    
Porphyra drewiana AY766362
1506    
Porphyra fucicola AF172595
1506    
Porphyra haitanensis AB015795
516    
AB013181
1506    
Porphyra kanakaensis AF172580
516   exon sequence from AF175556
Porphyra katadae AB013184
516    
1506    
Porphyra leucosticta AF172576
516   exon sequence from AF175557
AF172598
1506   exon sequence from AF175557
AF342746
516 b.I1  
Porphyra lucasii AY139685
516   synonym: Porphyra sp. WELT A23051
Porphyra nereocystis AF172577
516   exon sequence from AF175542
Porphyra onoi AB015794
516    
Porphyra pseudolanceolata AF172599
1506   exon sequence from AF175543
Porphyra pseudolinearis AB013185
516    
1506    
Porphyra purpurea AF172575
516   exon sequence from AF175551
AF172588
1506   exon sequence from AF175551
Porphyra rakiura AF136425
516    
1506    
AY139682
516    
AY139684
516    
Porphyra rediviva AF172600
1506   exon sequence from AF175544
Porphyra sp. AB013182
516    
1506    
AF136420
516    
1506    
AF136422
1506    
AB017077
1506    
Porphyra spiralis L26177
1506 a.I1  
L26176
1506 a.I1  
L26175
1506 a.I1  
Porphyra suborbiculata AF378658
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378650
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378657
516    
AF378656
516    
AF378655
516    
AF378665
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378664
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378663
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378662
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF136424
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378661
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378660
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378659
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378649
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378654
516   synonym Porphyra carolinensis
1506   synonym Porphyra carolinensis
AF378653
516   synonym Porphyra carolinensis
1506   synonym Porphyra carolinensis
AF133792
516   synonym Porphyra carolinensis
AB015796
516    
AF378651
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AB013180
516    
AF378652
516    
1506    
Porphyra tenera AB029883
516   P2 P2.1 missing some part
1506    
AB000964
516    
AB029880
516    
1506    
AB101442
516    
1506    
D86237
516   intron not annotated
D86236
516   intron not annotated
AB029881
516    
1506    
AB013176
516    
1506    
AB013175
516    
1506    
AB029879
516    
1506    
AB100958
516    
1506    
AB100959
516    
1506    
AB029882
516   P2 P2.1 missing some part
1506    
AB029884
516   P2 P2.1 missing some part
1506    
Porphyra tenuipedalis AB015797
516    
Porphyra torta AF172579
516   exon sequence from AF175552
Porphyra umbilicalis AF172573
516   New Jersey/NJ; exon from AF175553
AY347902
1506    
AY347908
1506    
AY347903
1506    
AY347904
1506    
AY347905
1506    
AY347909
1506    
AY347906
1506    
AY347910
1506    
AF172602
1506   Germany: Hallig Grode; exon sequence from AF175549
Porphyra virididentata AF136421
1506    
Porphyra yezoensis AY131005
516    
D79976
516 a.I1  
AB013177
516    
AB013178
516    
1506    
AB017078
1506    
AB017083
1506    
AB017075
1506    
AB017081
1506    
AB017076
1506    
unclassified Porphyra N 16S IC1 Porphyra sp. Baleia AY766358
516    
1506    
Porphyra sp. Brest AF172601
1506   exon sequence from AF175548
Porphyra sp. Marseille AF172597
1506   exon sequence from AF175546
Porphyra sp. Wales SW1 AF172574
516   exon from AF175554
Porphyra sp. strain GRB145 AY184349
516    
Porphyra sp. strain GRB488 AY184350
516