query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Physcia%' AND cell_loc LIKE '%Nucleus%' AND from_gene LIKE '%16S%' AND rna_class LIKE '%I%' AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Table 4B View:    

Structure File Format:     

Phylogeny Genus L EX RC Org Acc IP Struct. Comment
Eukaryota Fungi/Metazoa group Fungi Amandinea N 16S I Amandinea punctata AJ549800
788    
1049    
Buellia N 16S I Buellia aethalea AJ549801
114    
788    
1516    
Diplotomma N 16S I Diplotomma alboatrum AJ549802
287    
300    
497   intron in variable region ca E.coli position 497
516    
788    
940    
1199    
1210    
1516    
Diplotomma epipolium AJ506969
287    
300    
516    
788    
940    
1199    
1210    
1516    
Hyperphyscia N 16S I Hyperphyscia adglutinata AJ549803
287    
516    
940    
1049    
1210    
1516    
Phaeophyscia N 16S I Phaeophyscia ciliata AF224448
1506    
1516    
AF224447
1506    
1516    
AF224457
1506    
1516    
AF224455
1506    
1516    
AF224456
1506    
1516    
AF224450
1506    
1516    
AF224454
1506    
1516    
AF224354
1506    
1516    
Phaeophyscia constipata AF224374
1506    
1516    
Phaeophyscia endococcina AF224444
1506    
Phaeophyscia endophoenicea AF224445
1506    
Phaeophyscia hispidula AY648103
287    
788    
1199    
1210    
1384    
AY303138
1506   5' end of intron missing from GB entry
1516    
Phaeophyscia nigricans AF224375
1516    
Phaeophyscia orbicularis AJ549804
114    
287    
299    
AJ549805
788    
943    
1199    
1210    
1384    
1506    
1516    
AF224459
1506    
1516    
AF224460
1506    
1516    
AF224452
1506    
1516    
AF224451
1506    
1516    
AF224453
1506    
1516    
AF224458
1506    
1516    
AF224449
1506    
1516    
Phaeophyscia sciastra AF224446
1506    
Physcia N 16S I Physcia adscendens AF224430
1516    
AF224422
1516    
AF224423
1516    
Physcia aipolia AY648096
114    
516    
788    
943    
AY648097
114    
516    
788    
943    
DQ782876
516    
788    
AY648101
516    
788    
943    
AY648099
788    
1049    
1199    
1210    
AY303132
1516    
AF224383
1516    
AY303133
1516    
AF224391
1516    
AF224390
1516    
AY303136
1516    
AF224397
1516    
AF224394
1516    
AF224392
1516    
AF224398
1516    
AF224396
1516    
AF224393
1516    
AF224432
1516    
AY303135
1516    
AF224431
1516    
AF224395
1516    
Physcia albinea AF224433
1516    
Physcia alnophila AF224380
1516    
AF224382
1516    
AF224381
1516    
AF224434
1516    
Physcia biziana AF224417
1516    
Physcia caesia AY648098
114    
516    
788    
1210    
AY648100
516    
788    
943    
1049    
1210    
AF224435
1516    
AF224437
1516    
AF224388
1516    
AF224387
1516    
AF224379
1516    
AY303134
1516    
AY303131
1516    
AF224385
1516    
AF224384
1516    
AY498690
1516    
AF224438
1516    
AF224386
1516    
AF224436
1516    
AF224389
1516    
Physcia dimidiata AJ506970
516    
788    
AJ506970
AJ507615
1199   implicit from annotations
AJ507615
1210    
Physcia dubia AF224399
1516    
AF224420
1516    
AF224419
1516    
AF224418
1516    
AF224440
1516    
AF224403
1516    
AF224402
1516    
AF224401
1516    
AF224439
1516    
AF224413
1516    
AF224412
1516    
AF224411
1516    
AF224421
1516    
AF224400
1516    
Physcia leptalea AF224441
1516    
AF224428
1516    
AF224429
1516    
Physcia magnussonii AF224376
1516    
AF224377
1516    
Physcia phaea AF224378
1516    
Physcia stellaris AY648102
516    
788    
1049    
1210    
AF224408
1516    
AF224410
1516    
AY303137
1516    
AF224442
1516    
AF224407
1516    
AF224405
1516    
AF224404
1516    
AF224406
1516    
AY498689
1516    
AF224409
1516    
Physcia undulata AJ549806
114    
516    
788    
1389    
1506    
1516    
Physcia dimidiata N 16S I Physcia dimidiata var. dimidiata AF224415
1516    
AF224416
1516    
Physcia dimidiata var. ornata AF224414
1516    
Physcia tenella N 16S I Physcia tenella var. marina AF224426
1516    
AF224424
1516    
Physcia tenella var. tenella AF224427
1516    
AF224425
1516    
Rinodina N 16S I Rinodina gennarii AJ549808
287    
943    
1516    
Rinodina oxydata AJ506971
114    
497    
516    
940    
1199    
1389    
1516    
Tornabea N 16S I Tornabea scutellifera AJ549810
788    
943    
1199    
1516