query: SELECT phylo,cell_loc,from_gene,rna_class,accession,structure,tax_id,organism,comment,site_pos,seq_size,seq_nbr,gr_id FROM subint WHERE phylo LIKE '%Porphyra%' AND cell_loc LIKE '%Nucleus%' AND from_gene LIKE '%16S%' AND rna_class LIKE '%IC1%' AND available = 'Y' AND ready = 'Y' AND ( percentage > 89 OR percentage = -1 OR seq_size = -1 ) ORDER BY phylo,cell_loc,from_gene,site_pos,rna_class,seq_nbr,organism

Table 4B View:    

Structure File Format:     

Phylogeny Genus L EX RC Org Acc IP Struct. Comment
Eukaryota Rhodophyta Bangiophyceae Porphyra N 16S IC1 Porphyra capensis AY766361
516    
1506    
Porphyra cinnamomea AF136418
AF136419
516    
AF136419
1506    
Porphyra dentata AB013183
516    
1506    
Porphyra drewiana AY766362
1506    
Porphyra fucicola AF172595
1506    
Porphyra haitanensis AB015795
516    
AB013181
1506    
Porphyra kanakaensis AF172580
516   exon sequence from AF175556
Porphyra katadae AB013184
516    
1506    
Porphyra leucosticta AF172576
516   exon sequence from AF175557
AF172598
1506   exon sequence from AF175557
AF342746
516 b.I1  
Porphyra lucasii AY139685
516   synonym: Porphyra sp. WELT A23051
Porphyra nereocystis AF172577
516   exon sequence from AF175542
Porphyra onoi AB015794
516    
Porphyra pseudolanceolata AF172599
1506   exon sequence from AF175543
Porphyra pseudolinearis AB013185
516    
1506    
Porphyra purpurea AF172575
516   exon sequence from AF175551
AF172588
1506   exon sequence from AF175551
Porphyra rakiura AY139684
516    
AF136425
516    
1506    
AY139682
516    
Porphyra rediviva AF172600
1506   exon sequence from AF175544
Porphyra sp. AB013182
516    
1506    
AF136420
516    
1506    
AF136422
1506    
AB017077
1506    
Porphyra spiralis L26177
1506 a.I1  
L26176
1506 a.I1  
L26175
1506 a.I1  
Porphyra suborbiculata AF378661
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378664
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378663
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378662
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF136424
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378650
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378660
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378665
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378655
516    
AF378656
516    
AF378657
516    
AF378651
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378652
516    
1506    
AB013180
516    
AF378658
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378649
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
AF378654
516   synonym Porphyra carolinensis
1506   synonym Porphyra carolinensis
AF378653
516   synonym Porphyra carolinensis
1506   synonym Porphyra carolinensis
AF133792
516   synonym Porphyra carolinensis
AB015796
516    
AF378659
516   synonym Porphyra lilliputiana
1506   synonym Porphyra lilliputiana
Porphyra tenera AB100959
516    
1506    
AB029880
516    
1506    
D86236
516   intron not annotated
D86237
516   intron not annotated
AB029883
516   P2 P2.1 missing some part
1506    
AB000964
516    
AB101442
516    
1506    
AB029884
516   P2 P2.1 missing some part
1506    
AB100958
516    
1506    
AB029882
516   P2 P2.1 missing some part
1506    
AB029879
516    
1506    
AB013175
516    
1506    
AB013176
516    
1506    
AB029881
516    
1506    
Porphyra tenuipedalis AB015797
516    
Porphyra torta AF172579
516   exon sequence from AF175552
Porphyra umbilicalis AF172573
516   New Jersey/NJ; exon from AF175553
AY347904
1506    
AF172602
1506   Germany: Hallig Grode; exon sequence from AF175549
AY347910
1506    
AY347906
1506    
AY347909
1506    
AY347905
1506    
AY347903
1506    
AY347908
1506    
AY347902
1506    
Porphyra virididentata AF136421
1506    
Porphyra yezoensis AB013178
516    
1506    
AB013177
516    
D79976
516 a.I1  
AY131005
516    
AB017076
1506    
AB017075
1506    
AB017083
1506    
AB017078
1506    
AB017081
1506    
unclassified Porphyra N 16S IC1 Porphyra sp. Baleia AY766358
516    
1506    
Porphyra sp. Brest AF172601
1506   exon sequence from AF175548
Porphyra sp. Marseille AF172597
1506   exon sequence from AF175546
Porphyra sp. Wales SW1 AF172574
516   exon from AF175554
Porphyra sp. strain GRB145 AY184349
516    
Porphyra sp. strain GRB488 AY184350
516