*Details for Individual Sequences in the Dataset are Available Under the Respective Links
Overall | Archaea | Bacteria | Eukaryotic Chloroplast | Eukaryotic Mitochondrion | Eukaryotic Nuclear | |
---|---|---|---|---|---|---|
16S rRNA | ||||||
Sequences | 496 | 23 | 195 | 33 | 112 | 133 |
Average Optimal Accuracy1,2 | 40% | 62% | 48% | 42% | 30% | 34% |
Total Suboptimals | ||||||
Count | 370,848 | 17,227 | 146,055 | 24,717 | 83,232 | 99,617 |
Average | 748 | 749 | 749 | 749 | 743 | 749 |
% of Total Subopts | - | 5 | 39 | 7 | 22 | 27 |
Better Than Optimal3 | ||||||
Count | 137,420 | 4,791 | 58,537 | 10,848 | 27,753 | 35,491 |
Average | 277 | 208 | 300 | 329 | 248 | 267 |
% of Total Subopts | 37 | 28 | 40 | 44 | 33 | 36 |
Worse Than Optimal3 | ||||||
Count | 174,170 | 10,991 | 72,771 | 11,168 | 36,116 | 43,124 |
Average | 351 | 478 | 373 | 338 | 322 | 324 |
% of Total Subopts | 47 | 64 | 50 | 45 | 44 | 43 |
Same as Optimal3 | ||||||
Count | 59,258 | 1,445 | 14,747 | 2,701 | 19,363 | 21,002 |
Average | 119 | 63 | 76 | 82 | 173 | 158 |
% of Total Subopts | 16 | 8 | 10 | 11 | 23 | 21 |
- Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
- Accuracy values are determined by averaging the calculated accuracy values (number of comparatively predicted base-pairs that appear in the optimal structure prediction for a given sequence) for each individual sequence within a particular phylogenetic category.
- Number of suboptimal structure predictions within 12 kcal/mol of the optimal structure prediction with an accuracy higher, lower or equal to the optimal structure prediction for their respective sequence. Accuracy of a suboptimal structure prediction is calculated in the same manner as the accuracy for the optimal structure prediction. See RNA Secondary Structure Prediction and Prediction Accuracy Calculations in Methods.