*Details for Individual Sequences in the Dataset are Available Under the Respective Links
Overall | Archaea | Bacteria | Eukaryotic Chloroplast | Eukaryotic Mitochondrion | Eukaryotic Nuclear | |
---|---|---|---|---|---|---|
16S rRNA | ||||||
Sequences | 496 | 23 | 195 | 33 | 112 | 133 |
Average Optimal Accuracy1,2 | 41% | 62% | 49% | 46% | 30% | 34% |
Total Suboptimals | ||||||
Count | 370,848 | 17,227 | 146,055 | 24,717 | 83,232 | 99,617 |
Average | 748 | 749 | 749 | 749 | 743 | 749 |
% of Total Subopts | - | 5 | 39 | 7 | 22 | 27 |
Better Than Optimal3 | ||||||
Count | 138,313 | 5,281 | 56,400 | 6,756 | 34,140 | 37,536 |
Average | 279 | 230 | 280 | 205 | 305 | 282 |
% of Total Subopts | 37 | 31 | 37 | 27 | 41 | 38 |
Worse Than Optimal3 | ||||||
Count | 215,069 | 11,341 | 87,357 | 17,326 | 42,809 | 56,236 |
Average | 434 | 493 | 448 | 525 | 382 | 423 |
% of Total Subopts | 58 | 66 | 60 | 70 | 51 | 56 |
Same as Optimal3 | ||||||
Count | 17,466 | 605 | 4,098 | 635 | 6,283 | 5,845 |
Average | 35 | 26 | 21 | 19 | 56 | 44 |
% of Total Subopts | 5 | 4 | 3 | 3 | 8 | 6 |
- Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
- Accuracy values are determined by averaging the calculated accuracy values (number of comparatively predicted base-pairs that appear in the optimal structure prediction for a given sequence) for each individual sequence within a particular phylogenetic category.
- Number of suboptimal structure predictions within 12 kcal/mol of the optimal structure prediction with an accuracy higher, lower or equal to the optimal structure prediction for their respective sequence. Accuracy of a suboptimal structure prediction is calculated in the same manner as the accuracy for the optimal structure prediction. See RNA Secondary Structure Prediction and Prediction Accuracy Calculations in Methods.