*Details for Individual Sequences in the Dataset are Available Under the Respective Links

  Overall Archaea Bacteria Eukaryotic Chloroplast Eukaryotic Mitochondrion Eukaryotic Nuclear
16S rRNA            
Comparative1 145,058 7,711 63,939 10,313 21,537 41,558
2-10 30,765 1,649 13,650 2,154 4,661 8,651
11-20 37,844 2,220 15,984 2,538 5,509 11,593
21-30 24,982 1,206 11,314 1,894 3,763 6,805
31-40 16,141 907 7,059 1,080 1,963 5,132
41-50 11,438 583 5,286 779 1,448 3,342
51-60 6,731 365 3,242 528 1,071 1,525
61-70 5,356 270 2,203 445 1,079 1,359
71-80 3,865 157 1,671 320 741 976
81-90 4,557 202 1,990 295 827 1,243
91-100 3,379 152 1,540 280 475 932
Predicted1 146,747 7,997 60,650 9,642 23,337 45,121
2-10 32,664 1,689 14,390 2,232 5,057 9,296
11-20 38,699 2,261 15,911 2,473 6,345 11,709
21-30 22,643 1,228 9,215 1,464 3,682 7,054
31-40 15,452 922 6,638 1,077 2,150 4,665
41-50 10,681 600 4,377 669 1,562 3,473
51-60 7,551 450 3,204 507 1,096 2,294
61-70 5,755 279 2,121 399 1,060 1,896
71-80 4,898 194 1,895 302 842 1,665
81-90 4,743 206 1,798 309 841 1,589
91-100 3,661 168 1,101 210 702 1,480
Predicted Correctly1 74,104 5,572 36,993 5,119 8,416 18,004
2-10 18,345 1,284 9,617 1,262 2,045 4,137
11-20 20,730 1,690 9,649 1,337 2,563 5,491
21-30 11,742 738 5,790 855 1,504 2,855
31-40 7,508 633 3,966 550 660 1,699
41-50 4,929 395 2,469 309 530 1,226
51-60 3,808 303 2,094 282 370 759
61-70 2,383 229 1,002 195 332 625
71-80 1,495 118 642 131 147 457
81-90 1,951 115 1,101 116 143 476
91-100 1,213 67 663 82 122 279
Average Accuracy2            
2-10 57% 78% 70% 58% 42% 47%
11-20 53% 76% 60% 53% 45% 47%
21-30 46% 61% 51% 45% 38% 41%
31-40 44% 70% 56% 51% 29% 33%
41-50 41% 67% 46% 40% 34% 36%
51-60 52% 83% 64% 54% 31% 47%
61-70 42% 85% 44% 45% 25% 45%
71-80 37% 73% 37% 40% 17% 46%
81-90 40% 59% 55% 39% 15% 36%
91-100 32% 41% 43% 31% 17% 29%
Max Accuracy3            
2-10 93% 93% 93% 75% 78% 68%
11-20 90% 89% 90% 73% 77% 65%
21-30 80% 73% 77% 79% 80% 68%
31-40 95% 95% 91% 88% 92% 70%
41-50 100% 96% 83% 81% 100% 88%
51-60 100% 100% 100% 100% 100% 100%
61-70 100% 100% 100% 100% 89% 100%
71-80 100% 100% 100% 100% 100% 89%
81-90 100% 100% 100% 100% 100% 100%
91-100 100% 100% 100% 100% 100% 100%
Min Accuracy4            
2-10 0% 63% 38% 33% 0% 18%
11-20 0% 65% 36% 34% 0% 19%
21-30 0% 46% 25% 14% 0% 9%
31-40 0% 40% 10% 0% 0% 13%
41-50 0% 42% 4% 0% 0% 0%
51-60 0% 19% 0% 0% 0% 0%
61-70 0% 33% 0% 0% 0% 0%
71-80 0% 14% 0% 0% 0% 0%
81-90 0% 0% 0% 0% 0% 0%
91-100 0% 0% 0% 0% 0% 0%
23S rRNA
Comparative1 134,085 10,655 45,984 18,094 26,043 33,309
2-10 31,877 2,595 10,675 4,271 6,654 7,682
11-20 38,733 2,997 13,355 5,315 7,804 9,262
21-30 19,564 1,494 6,450 2,718 3,704 5,198
31-40 8,608 759 2,917 1,048 1,485 2,399
41-50 7,752 587 2,548 996 1,441 2,180
51-60 7,995 550 2,745 1,023 1,546 2,131
61-70 5,720 382 2,063 775 1,135 1,365
71-80 6,230 504 2,444 974 891 1,417
81-90 4,092 440 1,505 549 604 994
91-100 3,514 347 1,282 425 779 681
Predicted1 135,814 10,608 42,418 17,388 29,170 36,230
2-10 29,969 2,419 10,094 4,153 6,110 7,193
11-20 37,968 2,781 12,346 4,912 8,154 9,775
21-30 19,623 1,502 5,930 2,382 4,305 5,504
31-40 11,247 899 3,139 1,297 2,530 3,382
41-50 8,420 670 2,324 892 1,976 2,558
51-60 7,374 569 2,068 966 1,676 2,095
61-70 6,381 452 1,950 838 1,412 1,729
71-80 6,175 509 2,011 853 1,178 1,624
81-90 4,924 472 1,479 624 985 1,364
91-100 3,733 335 1,077 471 844 1,006
Predicted Correctly1 65,194 6,572 25,590 8,017 9,998 15,017
2-10 15,902 1,503 6,469 2,117 2,468 3,345
11-20 21,066 1,906 8,477 2,691 3,375 4,617
21-30 8,886 852 3,250 1,167 1,434 2,183
31-40 4,060 482 1,509 406 582 1,081
41-50 3,445 391 1,240 320 553 941
51-60 2,816 266 912 324 551 763
61-70 2,456 227 1,027 249 401 552
71-80 3,063 378 1,345 416 266 658
81-90 2,185 346 822 240 179 598
91-100 1,315 221 539 87 189 279
Average Accuracy2            
2-10 47% 58% 61% 49% 33% 43%
11-20 52% 64% 63% 51% 40% 50%
21-30 43% 57% 50% 43% 35% 42%
31-40 43% 63% 52% 39% 32% 44%
41-50 42% 66% 48% 33% 34% 42%
51-60 35% 48% 33% 32% 33% 35%
61-70 39% 59% 50% 32% 29% 39%
71-80 40% 75% 55% 42% 15% 47%
81-90 45% 79% 54% 45% 20% 61%
91-100 34% 64% 41% 22% 22% 40%
Max Accuracy3            
2-10 72% 65% 72% 65% 61% 62%
11-20 77% 75% 77% 63% 66% 67%
21-30 69% 69% 69% 59% 65% 63%
31-40 92% 91% 86% 68% 92% 71%
41-50 92% 92% 86% 70% 87% 74%
51-60 100% 86% 62% 71% 100% 72%
61-70 100% 86% 79% 53% 100% 69%
71-80 94% 94% 82% 70% 85% 75%
81-90 100% 100% 92% 76% 100% 100%
91-100 100% 100% 88% 60% 80% 82%
Min Accuracy4            
2-10 0% 51% 38% 25% 0% 31%
11-20 0% 43% 44% 29% 0% 34%
21-30 0% 39% 23% 15% 0% 24%
31-40 0% 48% 3% 8% 0% 11%
41-50 0% 30% 3% 0% 0% 0%
51-60 0% 13% 0% 0% 0% 9%
61-70 0% 35% 4% 0% 0% 3%
71-80 0% 40% 0% 0% 0% 6%
81-90 0% 44% 0% 0% 0% 0%
91-100 0% 30% 0% 0% 0% 0%
  1. Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
  2. Accuracy values are determined by averaging the calculated accuracy values for each individual sequence within a particular RNA Contact Distance category.
  3. Best accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.
  4. Worst accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.