*Details for Individual Sequences in the Dataset are Available Under the Respective Links

  Overall Archaea Bacteria Eukaryotic Chloroplast Eukaryotic Mitochondrion Eukaryotic Nuclear
16S rRNA            
Comparative1 145,058 7,711 63,939 10,313 21,537 41,558
2-10 30,765 1,649 13,650 2,154 4,661 8,651
11-20 37,844 2,220 15,984 2,538 5,509 11,593
21-30 24,982 1,206 11,314 1,894 3,763 6,805
31-40 16,141 907 7,059 1,080 1,963 5,132
41-50 11,438 583 5,286 779 1,448 3,342
51-60 6,731 365 3,242 528 1,071 1,525
61-70 5,356 270 2,203 445 1,079 1,359
71-80 3,865 157 1,671 320 741 976
81-90 4,557 202 1,990 295 827 1,243
91-100 3,379 152 1,540 280 475 932
Predicted1 150,886 8,174 62,547 10,111 23,882 46,172
2-10 32,735 1,721 14,581 2,200 4,886 9,347
11-20 39,690 2,286 16,480 2,566 6,420 11,938
21-30 23,882 1,235 9,763 1,624 3,906 7,354
31-40 16,128 942 6,768 1,143 2,385 4,890
41-50 11,273 605 4,678 692 1,671 3,627
51-60 7,757 459 3,365 570 1,116 2,247
61-70 5,877 322 2,139 451 1,068 1,897
71-80 4,805 204 1,708 324 852 1,717
81-90 4,836 220 1,847 318 848 1,603
91-100 3,903 180 1,218 223 730 1,552
Predicted Correctly1 75,763 5,605 37,887 5,571 8,400 18,300
2-10 18,410 1,282 9,610 1,306 1,991 4,221
11-20 21,313 1,695 9,957 1,418 2,579 5,664
21-30 12,111 747 6,038 945 1,500 2,881
31-40 7,489 614 3,887 610 680 1,698
41-50 5,238 402 2,706 334 546 1,250
51-60 3,930 316 2,187 316 349 762
61-70 2,451 248 1,029 237 318 619
71-80 1,485 117 615 155 150 448
81-90 2,034 119 1,148 152 155 460
91-100 1,302 65 710 98 132 297
Average Accuracy2            
2-10 57% 78% 70% 60% 40% 48%
11-20 55% 76% 62% 56% 45% 48%
21-30 47% 62% 53% 49% 38% 41%
31-40 45% 68% 55% 57% 32% 33%
41-50 44% 69% 51% 43% 36% 37%
51-60 54% 86% 67% 60% 30% 48%
61-70 43% 92% 45% 53% 24% 45%
71-80 36% 73% 36% 45% 17% 45%
81-90 42% 59% 57% 49% 16% 36%
91-100 36% 40% 46% 35% 23% 30%
Max Accuracy3            
2-10 90% 90% 90% 77% 78% 69%
11-20 89% 89% 89% 75% 77% 70%
21-30 83% 73% 77% 79% 83% 67%
31-40 100% 95% 91% 88% 100% 71%
41-50 100% 96% 90% 81% 100% 79%
51-60 100% 100% 100% 100% 100% 100%
61-70 100% 100% 100% 100% 89% 100%
71-80 100% 100% 100% 100% 100% 89%
81-90 100% 90% 100% 100% 100% 100%
91-100 100% 100% 100% 100% 100% 100%
Min Accuracy4            
2-10 0% 58% 36% 35% 0% 21%
11-20 0% 54% 29% 34% 0% 21%
21-30 0% 43% 21% 17% 0% 7%
31-40 0% 48% 7% 20% 0% 0%
41-50 0% 42% 4% 4% 0% 0%
51-60 0% 50% 0% 0% 0% 0%
61-70 0% 58% 0% 0% 0% 0%
71-80 0% 14% 0% 0% 0% 0%
81-90 0% 0% 0% 0% 0% 0%
91-100 0% 0% 0% 0% 0% 0%
23S rRNA            
Comparative1 134,085 10,655 45,984 18,094 26,043 33,309
2-10 31,877 2,595 10,675 4,271 6,654 7,682
11-20 38,733 2,997 13,355 5,315 7,804 9,262
21-30 19,564 1,494 6,450 2,718 3,704 5,198
31-40 8,608 759 2,917 1,048 1,485 2,399
41-50 7,752 587 2,548 996 1,441 2,180
51-60 7,995 550 2,745 1,023 1,546 2,131
61-70 5,720 382 2,063 775 1,135 1,365
71-80 6,230 504 2,444 974 891 1,417
81-90 4,092 440 1,505 549 604 994
91-100 3,514 347 1,282 425 779 681
Predicted1 137,780 10,788 43,157 17,630 29,279 36,926
2-10 30,031 2,416 10,110 4,194 6,038 7,273
11-20 38,423 2,824 12,521 5,052 8,186 9,840
21-30 20,233 1,555 6,108 2,490 4,417 5,663
31-40 11,719 953 3,317 1,346 2,600 3,503
41-50 8,672 689 2,417 924 1,964 2,678
51-60 7,318 548 2,018 944 1,641 2,167
61-70 6,248 415 1,949 812 1,355 1,717
71-80 6,387 515 2,059 874 1,229 1,710
81-90 5,006 505 1,510 584 991 1,416
91-100 3,743 368 1,148 410 858 959
Predicted Correctly1 67,130 6,725 26,300 8,452 10,017 15,636
2-10 16,096 1,530 6,521 2,192 2,431 3,422
11-20 21,636 1,958 8,682 2,857 3,372 4,767
21-30 9,276 899 3,394 1,239 1,461 2,283
31-40 4,289 501 1,615 430 594 1,149
41-50 3,601 395 1,297 343 566 1,000
51-60 2,861 263 890 352 545 811
61-70 2,520 224 1,037 270 402 587
71-80 3,215 378 1,408 437 287 705
81-90 2,255 350 857 234 187 627
91-100 1,381 227 599 98 172 285
Average Accuracy2            
2-10 47% 59% 61% 51% 33% 44%
11-20 53% 65% 65% 54% 40% 51%
21-30 45% 60% 53% 46% 37% 43%
31-40 46% 66% 55% 41% 34% 46%
41-50 44% 67% 51% 35% 35% 45%
51-60 35% 48% 32% 35% 33% 37%
61-70 40% 59% 50% 35% 28% 42%
71-80 42% 75% 57% 44% 16% 50%
81-90 46% 80% 56% 43% 20% 64%
91-100 35% 66% 46% 24% 19% 41%
Max Accuracy3            
2-10 73% 64% 73% 61% 61% 61%
11-20 82% 75% 82% 64% 67% 74%
21-30 75% 73% 75% 61% 68% 63%
31-40 100% 87% 92% 71% 100% 71%
41-50 100% 81% 85% 63% 100% 79%
51-60 100% 79% 62% 61% 100% 72%
61-70 100% 88% 77% 62% 100% 72%
71-80 94% 94% 85% 76% 85% 78%
81-90 100% 100% 90% 75% 100% 100%
91-100 100% 100% 93% 82% 100% 88%
Min Accuracy4            
2-10 0% 52% 38% 25% 0% 28%
11-20 0% 44% 41% 29% 0% 32%
21-30 0% 42% 22% 15% 0% 24%
31-40 0% 52% 16% 8% 0% 11%
41-50 0% 45% 9% 9% 0% 0%
51-60 0% 13% 0% 0% 0% 9%
61-70 0% 13% 11% 6% 0% 13%
71-80 0% 33% 18% 0% 0% 6%
81-90 0% 44% 0% 0% 0% 0%
91-100 0% 33% 0% 0% 0% 0%
  1. Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
  2. Accuracy values are determined by averaging the calculated accuracy values for each individual sequence within a particular RNA Contact Distance category.
  3. Best accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.
  4. Worst accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.