*Details for Individual Sequences in the Dataset are Available Under the Respective Links
Overall | Archaea | Bacteria | Eukaryotic Chloroplast | Eukaryotic Mitochondrion | Eukaryotic Nuclear | |
---|---|---|---|---|---|---|
16S rRNA | ||||||
Comparative1 | 145,058 | 7,711 | 63,939 | 10,313 | 21,537 | 41,558 |
2-10 | 30,765 | 1,649 | 13,650 | 2,154 | 4,661 | 8,651 |
11-20 | 37,844 | 2,220 | 15,984 | 2,538 | 5,509 | 11,593 |
21-30 | 24,982 | 1,206 | 11,314 | 1,894 | 3,763 | 6,805 |
31-40 | 16,141 | 907 | 7,059 | 1,080 | 1,963 | 5,132 |
41-50 | 11,438 | 583 | 5,286 | 779 | 1,448 | 3,342 |
51-60 | 6,731 | 365 | 3,242 | 528 | 1,071 | 1,525 |
61-70 | 5,356 | 270 | 2,203 | 445 | 1,079 | 1,359 |
71-80 | 3,865 | 157 | 1,671 | 320 | 741 | 976 |
81-90 | 4,557 | 202 | 1,990 | 295 | 827 | 1,243 |
91-100 | 3,379 | 152 | 1,540 | 280 | 475 | 932 |
Predicted1 | 150,886 | 8,174 | 62,547 | 10,111 | 23,882 | 46,172 |
2-10 | 32,735 | 1,721 | 14,581 | 2,200 | 4,886 | 9,347 |
11-20 | 39,690 | 2,286 | 16,480 | 2,566 | 6,420 | 11,938 |
21-30 | 23,882 | 1,235 | 9,763 | 1,624 | 3,906 | 7,354 |
31-40 | 16,128 | 942 | 6,768 | 1,143 | 2,385 | 4,890 |
41-50 | 11,273 | 605 | 4,678 | 692 | 1,671 | 3,627 |
51-60 | 7,757 | 459 | 3,365 | 570 | 1,116 | 2,247 |
61-70 | 5,877 | 322 | 2,139 | 451 | 1,068 | 1,897 |
71-80 | 4,805 | 204 | 1,708 | 324 | 852 | 1,717 |
81-90 | 4,836 | 220 | 1,847 | 318 | 848 | 1,603 |
91-100 | 3,903 | 180 | 1,218 | 223 | 730 | 1,552 |
Predicted Correctly1 | 75,763 | 5,605 | 37,887 | 5,571 | 8,400 | 18,300 |
2-10 | 18,410 | 1,282 | 9,610 | 1,306 | 1,991 | 4,221 |
11-20 | 21,313 | 1,695 | 9,957 | 1,418 | 2,579 | 5,664 |
21-30 | 12,111 | 747 | 6,038 | 945 | 1,500 | 2,881 |
31-40 | 7,489 | 614 | 3,887 | 610 | 680 | 1,698 |
41-50 | 5,238 | 402 | 2,706 | 334 | 546 | 1,250 |
51-60 | 3,930 | 316 | 2,187 | 316 | 349 | 762 |
61-70 | 2,451 | 248 | 1,029 | 237 | 318 | 619 |
71-80 | 1,485 | 117 | 615 | 155 | 150 | 448 |
81-90 | 2,034 | 119 | 1,148 | 152 | 155 | 460 |
91-100 | 1,302 | 65 | 710 | 98 | 132 | 297 |
Average Accuracy2 | ||||||
2-10 | 57% | 78% | 70% | 60% | 40% | 48% |
11-20 | 55% | 76% | 62% | 56% | 45% | 48% |
21-30 | 47% | 62% | 53% | 49% | 38% | 41% |
31-40 | 45% | 68% | 55% | 57% | 32% | 33% |
41-50 | 44% | 69% | 51% | 43% | 36% | 37% |
51-60 | 54% | 86% | 67% | 60% | 30% | 48% |
61-70 | 43% | 92% | 45% | 53% | 24% | 45% |
71-80 | 36% | 73% | 36% | 45% | 17% | 45% |
81-90 | 42% | 59% | 57% | 49% | 16% | 36% |
91-100 | 36% | 40% | 46% | 35% | 23% | 30% |
Max Accuracy3 | ||||||
2-10 | 90% | 90% | 90% | 77% | 78% | 69% |
11-20 | 89% | 89% | 89% | 75% | 77% | 70% |
21-30 | 83% | 73% | 77% | 79% | 83% | 67% |
31-40 | 100% | 95% | 91% | 88% | 100% | 71% |
41-50 | 100% | 96% | 90% | 81% | 100% | 79% |
51-60 | 100% | 100% | 100% | 100% | 100% | 100% |
61-70 | 100% | 100% | 100% | 100% | 89% | 100% |
71-80 | 100% | 100% | 100% | 100% | 100% | 89% |
81-90 | 100% | 90% | 100% | 100% | 100% | 100% |
91-100 | 100% | 100% | 100% | 100% | 100% | 100% |
Min Accuracy4 | ||||||
2-10 | 0% | 58% | 36% | 35% | 0% | 21% |
11-20 | 0% | 54% | 29% | 34% | 0% | 21% |
21-30 | 0% | 43% | 21% | 17% | 0% | 7% |
31-40 | 0% | 48% | 7% | 20% | 0% | 0% |
41-50 | 0% | 42% | 4% | 4% | 0% | 0% |
51-60 | 0% | 50% | 0% | 0% | 0% | 0% |
61-70 | 0% | 58% | 0% | 0% | 0% | 0% |
71-80 | 0% | 14% | 0% | 0% | 0% | 0% |
81-90 | 0% | 0% | 0% | 0% | 0% | 0% |
91-100 | 0% | 0% | 0% | 0% | 0% | 0% |
23S rRNA | ||||||
Comparative1 | 134,085 | 10,655 | 45,984 | 18,094 | 26,043 | 33,309 |
2-10 | 31,877 | 2,595 | 10,675 | 4,271 | 6,654 | 7,682 |
11-20 | 38,733 | 2,997 | 13,355 | 5,315 | 7,804 | 9,262 |
21-30 | 19,564 | 1,494 | 6,450 | 2,718 | 3,704 | 5,198 |
31-40 | 8,608 | 759 | 2,917 | 1,048 | 1,485 | 2,399 |
41-50 | 7,752 | 587 | 2,548 | 996 | 1,441 | 2,180 |
51-60 | 7,995 | 550 | 2,745 | 1,023 | 1,546 | 2,131 |
61-70 | 5,720 | 382 | 2,063 | 775 | 1,135 | 1,365 |
71-80 | 6,230 | 504 | 2,444 | 974 | 891 | 1,417 |
81-90 | 4,092 | 440 | 1,505 | 549 | 604 | 994 |
91-100 | 3,514 | 347 | 1,282 | 425 | 779 | 681 |
Predicted1 | 137,780 | 10,788 | 43,157 | 17,630 | 29,279 | 36,926 |
2-10 | 30,031 | 2,416 | 10,110 | 4,194 | 6,038 | 7,273 |
11-20 | 38,423 | 2,824 | 12,521 | 5,052 | 8,186 | 9,840 |
21-30 | 20,233 | 1,555 | 6,108 | 2,490 | 4,417 | 5,663 |
31-40 | 11,719 | 953 | 3,317 | 1,346 | 2,600 | 3,503 |
41-50 | 8,672 | 689 | 2,417 | 924 | 1,964 | 2,678 |
51-60 | 7,318 | 548 | 2,018 | 944 | 1,641 | 2,167 |
61-70 | 6,248 | 415 | 1,949 | 812 | 1,355 | 1,717 |
71-80 | 6,387 | 515 | 2,059 | 874 | 1,229 | 1,710 |
81-90 | 5,006 | 505 | 1,510 | 584 | 991 | 1,416 |
91-100 | 3,743 | 368 | 1,148 | 410 | 858 | 959 |
Predicted Correctly1 | 67,130 | 6,725 | 26,300 | 8,452 | 10,017 | 15,636 |
2-10 | 16,096 | 1,530 | 6,521 | 2,192 | 2,431 | 3,422 |
11-20 | 21,636 | 1,958 | 8,682 | 2,857 | 3,372 | 4,767 |
21-30 | 9,276 | 899 | 3,394 | 1,239 | 1,461 | 2,283 |
31-40 | 4,289 | 501 | 1,615 | 430 | 594 | 1,149 |
41-50 | 3,601 | 395 | 1,297 | 343 | 566 | 1,000 |
51-60 | 2,861 | 263 | 890 | 352 | 545 | 811 |
61-70 | 2,520 | 224 | 1,037 | 270 | 402 | 587 |
71-80 | 3,215 | 378 | 1,408 | 437 | 287 | 705 |
81-90 | 2,255 | 350 | 857 | 234 | 187 | 627 |
91-100 | 1,381 | 227 | 599 | 98 | 172 | 285 |
Average Accuracy2 | ||||||
2-10 | 47% | 59% | 61% | 51% | 33% | 44% |
11-20 | 53% | 65% | 65% | 54% | 40% | 51% |
21-30 | 45% | 60% | 53% | 46% | 37% | 43% |
31-40 | 46% | 66% | 55% | 41% | 34% | 46% |
41-50 | 44% | 67% | 51% | 35% | 35% | 45% |
51-60 | 35% | 48% | 32% | 35% | 33% | 37% |
61-70 | 40% | 59% | 50% | 35% | 28% | 42% |
71-80 | 42% | 75% | 57% | 44% | 16% | 50% |
81-90 | 46% | 80% | 56% | 43% | 20% | 64% |
91-100 | 35% | 66% | 46% | 24% | 19% | 41% |
Max Accuracy3 | ||||||
2-10 | 73% | 64% | 73% | 61% | 61% | 61% |
11-20 | 82% | 75% | 82% | 64% | 67% | 74% |
21-30 | 75% | 73% | 75% | 61% | 68% | 63% |
31-40 | 100% | 87% | 92% | 71% | 100% | 71% |
41-50 | 100% | 81% | 85% | 63% | 100% | 79% |
51-60 | 100% | 79% | 62% | 61% | 100% | 72% |
61-70 | 100% | 88% | 77% | 62% | 100% | 72% |
71-80 | 94% | 94% | 85% | 76% | 85% | 78% |
81-90 | 100% | 100% | 90% | 75% | 100% | 100% |
91-100 | 100% | 100% | 93% | 82% | 100% | 88% |
Min Accuracy4 | ||||||
2-10 | 0% | 52% | 38% | 25% | 0% | 28% |
11-20 | 0% | 44% | 41% | 29% | 0% | 32% |
21-30 | 0% | 42% | 22% | 15% | 0% | 24% |
31-40 | 0% | 52% | 16% | 8% | 0% | 11% |
41-50 | 0% | 45% | 9% | 9% | 0% | 0% |
51-60 | 0% | 13% | 0% | 0% | 0% | 9% |
61-70 | 0% | 13% | 11% | 6% | 0% | 13% |
71-80 | 0% | 33% | 18% | 0% | 0% | 6% |
81-90 | 0% | 44% | 0% | 0% | 0% | 0% |
91-100 | 0% | 33% | 0% | 0% | 0% | 0% |
- Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
- Accuracy values are determined by averaging the calculated accuracy values for each individual sequence within a particular RNA Contact Distance category.
- Best accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.
- Worst accuracy for a single structure's set of base pairs in a particular RNA Contact Distance category, see values for all sequences here.