*Details for Individual Sequences in the Dataset are Available Under the Respective Links
Sequences | Total Comp BP1 | Total Comp BP Correct1 | Avg Comp BP1 | Avg Comp BP1 Correct | Accuracy2 | Std Deviation | Max3 | Min4 | |
---|---|---|---|---|---|---|---|---|---|
tRNA - download comparative structure models as: PDF,TEXT | |||||||||
Overall | 569 | 11,796 | 7,799 | 21 | 14 | 66% | 24% | 100% | 0% |
Archaea | 76 | 1,599 | 1,080 | 21 | 14 | 68% | 21% | 100% | 32% |
Bacteria | 155 | 3,225 | 2,310 | 21 | 15 | 72% | 23% | 100% | 0% |
Eucarya (n)5 | 207 | 4,265 | 2,452 | 21 | 12 | 57% | 24% | 100% | 0% |
Eucarya (c) | 131 | 2,707 | 1,957 | 21 | 15 | 72% | 23% | 100% | 19% |
5S rRNA - download comparative structure models as: PDF,TEXT | |||||||||
Overall | 90 | 3,106 | 2,181 | 35 | 24 | 69% | 24% | 97% | 0% |
Archaea | 12 | 463 | 377 | 39 | 31 | 81% | 20% | 93% | 21% |
Bacteria | 28 | 923 | 550 | 33 | 20 | 58% | 27% | 97% | 0% |
Eucarya (n) | 45 | 1,552 | 1,134 | 34 | 25 | 73% | 22% | 94% | 0% |
Eucarya (c) | 4 | 134 | 96 | 34 | 24 | 71% | 22% | 85% | 39% |
Eucarya (m) | 1 | 34 | 24 | - | - | 71% | - | - | - |
16S rRNA - download comparative structure models as: PDF,TEXT | |||||||||
Overall | 496 | 191,994 | 80,118 | 387 | 162 | 40% | 13% | 80% | 0% |
Archaea | 23 | 10,211 | 6,330 | 444 | 275 | 62% | 9% | 80% | 46% |
Bacteria | 195 | 83,385 | 40,002 | 428 | 205 | 48% | 9% | 68% | 19% |
Eucarya (n) | 133 | 55,013 | 18,723 | 414 | 141 | 34% | 8% | 55% | 15% |
Eucarya (c) | 33 | 13,406 | 5,593 | 406 | 169 | 42% | 12% | 71% | 19% |
Eucarya (m) | 112 | 29,979 | 9,470 | 268 | 85 | 30% | 11% | 65% | 0% |
23S rRNA - download comparative structure models as: PDF,TEXT | |||||||||
Overall | 256 | 178,958 | 75,508 | 699 | 295 | 40% | 13% | 68% | 0% |
Archaea | 17 | 14,093 | 7,933 | 829 | 467 | 56% | 8% | 68% | 40% |
Bacteria | 75 | 61,101 | 29,169 | 815 | 389 | 48% | 8% | 60% | 26% |
Eucarya (n) | 52 | 45,284 | 18,174 | 871 | 350 | 40% | 9% | 55% | 19% |
Eucarya (c) | 31 | 24,226 | 8,840 | 781 | 285 | 37% | 7% | 48% | 21% |
Eucarya (m) | 81 | 34,254 | 11,392 | 423 | 141 | 30% | 12% | 56% | 0% |
- Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
- Accuracy values are determined by averaging the calculated accuracy for each individual sequence within a particular category.
- Accuracy of single best predicted structure.
- Accuracy of single worst predicted structure.
- (n), Nuclear encoded sequences; (c), Chloroplast encoded sequences; (m), Mitochondrial encoded sequences.