Accession Comparative Base Pairs1 Predicted Correctly1 Accuracy Diagrams2
Archaea
Aeropyrum pernix AP000062 451 283 63% PDF | Text
Archaeoglobus fulgidus X05567 AE000965 448 208 46% PDF | Text
Haloarcula marismortui rrnA X61688 438 267 61% PDF | Text
Haloarcula marismortui rrnB X61689 440 304 69% PDF | Text
Halobacterium sp. AE005128 440 319 73% PDF | Text
Haloferax volcanii K00421 439 350 80% PDF | Text
Methanobacterium formicicum M36508 438 303 69% PDF | Text
Methanococcus jannaschii U67517 L77117 445 236 53% PDF | Text
Methanococcus vannielii M36507 437 236 54% PDF | Text
Methanospirillum hungatei M60880 432 198 46% PDF | Text
Methanothermobacter thermautotrophicus AE000930 442 279 63% PDF | Text
Natronobacterium innermongoliae AF009601 442 297 67% PDF | Text
Natronorubrum bangense Y14028 441 295 67% PDF | Text
Pyrococcus abyssi AJ248283 453 305 67% PDF | Text
Pyrococcus furiosus U20163 444 265 60% PDF | Text
Pyrococcus horikoshii AP000001 452 305 67% PDF | Text
Pyrodictium occultum M21087 447 243 54% PDF | Text
Sulfolobus acidocaldarius D14876 446 261 59% PDF | Text
Sulfolobus P2 NPA3 447 230 51% NPA
Sulfolobus solfataricus X03235 446 261 59% PDF | Text
Thermococcus celer M21529 447 323 72% PDF | Text
Thermoplasma acidophilum AL445067 M38637 440 265 60% PDF | Text
Thermoproteus tenax M35966 456 297 65% PDF | Text
Bacteria
Acidobacterium capsulatum D26171 401 185 46% PDF | Text
Acinetobacter calcoaceticus M34139 434 195 45% PDF | Text
Actinomyces israelii X82450 407 123 30% PDF | Text
Aeromonas hydrophila X60407 446 232 52% PDF | Text
Agrobacterium tumefaciens M11223 429 239 56% PDF | Text
Allochromatium vinosum M26629 423 157 37% PDF | Text
Anabaena sp. X59559 432 204 47% PDF | Text
Aquifex aeolicus AE000709 AE000751 473 292 62% PDF | Text
Aquifex pyrophilus M83548 468 287 61% PDF | Text
Arthrobacter globiformis M23411 446 209 47% PDF | Text
Azorhizobium caulinodans D11342 424 207 49% PDF | Text
Bacillus anthracis X55059 393 189 48% PDF | Text
Bacillus cereus X55060 407 214 53% PDF | Text
Bacillus halodurans AB013373 450 257 57% PDF | Text
Bacillus subtilis K00637 451 240 53% PDF | Text
Bacteroides fragilis M61006 442 262 59% PDF | Text
Bartonella bacilliformis Z11683 408 204 50% PDF | Text
Bartonella henselae M73229 410 218 53% PDF | Text
Bartonella quintana M11927 429 211 49% PDF | Text
Beggiatoa sp. 1401-13 L40997 428 179 42% PDF | Text
Bordetella bronchiseptica U04948 448 239 53% PDF | Text
Bordetella parapertussis U04949 421 260 62% PDF | Text
Bordetella pertussis U04950 420 186 44% PDF | Text
Borrelia burgdorferi M88329 455 221 49% PDF | Text
Borrelia hermsii U42292 450 210 47% PDF | Text
Brachyspira hyodysenteriae U23035 421 158 38% PDF | Text
Bradyrhizobium japonicum Z35330 432 227 53% PDF | Text
Brevinema andersonii L31543 408 195 48% PDF | Text
Brucella melitensis L26166 400 224 56% PDF | Text
Buchnera sp. APS AP000398 420 166 40% PDF | Text
Burkholderia mallei S55008 376 171 45% PDF | Text
Burkholderia sp. U37342 432 231 53% PDF | Text
Campylobacter jejuni Z29326 442 212 48% PDF | Text
Campylobacter sputorum X67775 420 196 47% PDF | Text
Chlamydia muridarum AE002280 458 236 52% PDF | Text
Chlamydia trachomatis U68443 458 237 52% PDF | Text
Chlamydophila pneumoniae L06108 460 248 54% PDF | Text
Chlamydophila psittaci U68447 456 231 51% PDF | Text
Chlorobium vibrioforme M62791 430 206 48% PDF | Text
Chlorogloeopsis sp. PCC 7518 X68780 432 248 57% PDF | Text
Chromohalobacter marismortui X87222 431 188 44% PDF | Text
Citrobacter freundii M59291 416 166 40% PDF | Text
Clostridium botulinum F L37593 421 273 65% PDF | Text
Clostridium difficile X73450 423 232 55% PDF | Text
Clostridium innocuum M23732 440 236 54% PDF | Text
Clostridium perfringens M69264 438 235 54% PDF | Text
Clostridium tetani X74770 436 192 44% PDF | Text
Comamonas testosteroni M11224 441 219 50% PDF | Text
Corynebacterium diphtheriae X84248 432 146 34% PDF | Text
Coxiella burnetii M21291 418 202 48% PDF | Text
Cristispira CP1 U42638 430 172 40% PDF | Text
Deferribacter thermophilus U75602 460 245 53% PDF | Text
Deinococcus radiodurans M21413 437 249 57% PDF | Text
Desulfovibrio desulfuricans M34113 447 268 60% PDF | Text
Dichelobacter nodosus M35016 448 228 51% PDF | Text
Edwardsiella tarda AF015259 402 244 61% PDF | Text
Enterococcus faecalis Y18293 407 272 67% PDF | Text
Enterococcus faecium AF070223 435 263 60% PDF | Text
environ.Eubacteria clone W15 NPA 407 239 59% NPA
Epulopiscium sp. M99572 412 206 50% PDF | Text
Erysipelothrix rhusiopathiae M23728 430 243 57% PDF | Text
Escherichia coli J01695 457 240 53% PDF | Text
Eubacterium brachy Z36272 425 197 46% PDF | Text
Francisella tularensis Z21931 439 180 41% PDF | Text
Frankia sp. M55343 442 175 40% PDF | Text
Fusobacterium necrophorum X74408 423 180 43% PDF | Text
Fusobacterium nucleatum subsp. nucleatum M58683 430 206 48% PDF | Text
Gemmata obscuriglobus X56305 404 216 53% PDF | Text
Geotoga subterranea L10659 434 270 62% PDF | Text
Gluconacetobacter liquefaciens X75617 434 186 43% PDF | Text
Haemobartonella felis U95297 382 131 34% PDF | Text
Haemophilus influenzae X87977 407 165 41% PDF | Text
Haemophilus influenzae (operons A-F) U32741 U32744 U32755 U32847 U32697 U32708 447 199 45% PDF | Text
Halomonas halodenitrificans L04942 440 183 42% PDF | Text
Helicobacter pylori M88157 419 179 43% PDF | Text
Heliobacterium chlorum M11212 436 209 48% PDF | Text
Holophaga foetida X77215 441 206 47% PDF | Text
Isosphaera pallida X64372 398 232 58% PDF | Text
Klebsiella pneumoniae X80684 404 182 45% PDF | Text
Lactobacillus acidophilus M58802 430 223 52% PDF | Text
Lactococcus lactis subsp. lactis AE006456 451 280 62% PDF | Text
Legionella pneumophila M59157 425 183 43% PDF | Text
Leptonema illini M88719 442 200 45% PDF | Text
Leptospira interrogans X17547 440 294 67% PDF | Text
Leptospirillum ferriphilum AF356830 424 167 39% NPA
Listeria monocytogenes M58822 429 184 43% PDF | Text
Mesorhizobium loti AP003001 429 250 58% PDF | Text
Methylobacterium sp. Z23160 409 130 32% PDF | Text
Methylococcus capsulatus X72771 420 123 29% PDF | Text
Micrococcus luteus M38242 420 216 51% PDF | Text
Microcystis aeruginosa U03402 Z28699 406 159 39% PDF | Text
Mycobacterium avium X52918 415 142 34% PDF | Text
Mycobacterium leprae X56657 452 85 19% PDF | Text
Mycobacterium tuberculosis X52917 418 89 21% PDF | Text
Mycoplasma capricolum X00921 437 159 36% PDF | Text
Mycoplasma gallisepticum M22441 434 186 43% PDF | Text
Mycoplasma genitalium U39694 437 223 51% PDF | Text
Mycoplasma hyopneumoniae Y00149 443 284 64% PDF | Text
Mycoplasma mycoides M23943 376 116 31% PDF | Text
Mycoplasma pneumoniae M29061 420 209 50% PDF | Text
Myxococcus xanthus M34114 446 195 44% PDF | Text
Neisseria gonorrhoeae X07714 443 232 52% PDF | Text
Neisseria meningitidis AE002364 444 266 60% PDF | Text
Nocardia asteroides X80606 423 94 22% PDF | Text
Oscillatoria agardhii X84811 420 266 63% PDF | Text
Pasteurella multocida M35018 435 173 40% PDF | Text
Petrotoga miotherma L10657 364 197 54% PDF | Text
Pirellula marina X62912 409 130 32% PDF | Text
Pirellula staleyi M34126 433 202 47% PDF | Text
Planctomycetaceae Schlesner 670 X81948 427 232 54% PDF | Text
Plesiomonas shigelloides X74688 411 191 46% PDF | Text
Pleurocapsa sp. X78681 419 172 41% PDF | Text
Porphyromonas gingivalis L16492 419 141 34% PDF | Text
Proteus vulgaris X07652 456 262 57% PDF | Text
Pseudomonas aeruginosa M34133 424 187 44% PDF | Text
Pseudomonas putida D84020 448 249 56% PDF | Text
Pseudomonas sp. U37339 429 213 50% PDF | Text
Psychrobacter pacificensis AB016054 448 213 48% PDF | Text
Rhodobium orientis D30792 407 240 59% PDF | Text
Rhodoblastus acidophilus M34128 414 203 49% PDF | Text
Rhodococcus erythropolis AF001265 442 173 39% PDF | Text
Rickettsia bellii U11014 439 247 56% PDF | Text
Rickettsia prowazekii M21789 439 242 55% PDF | Text
Rickettsia rickettsii L36217 417 226 54% PDF | Text
Salmonella typhimurium X80681 447 209 47% PDF | Text
Serratia marcescens M59160 431 209 48% PDF | Text
Shewanella putrefaciens X81623 446 243 54% PDF | Text
Shigella dysenteriae X96966 428 221 52% PDF | Text
Spirochaeta aurantia M57740 436 239 55% PDF | Text
Staphylococcus aureus L36472 446 222 50% PDF | Text
Streptobacillus moniliformis Z35305 428 141 33% PDF | Text
Streptococcus mutans X58303 348 187 54% PDF | Text
Streptococcus pneumoniae X58312 349 209 60% PDF | Text
Streptococcus pyogenes X59029 333 115 35% PDF | Text
Streptomyces acidiscabies D63865 446 270 61% PDF | Text
Streptomyces albidoflavus Z76676 426 189 44% PDF | Text
Streptomyces albus X53163 341 160 47% PDF | Text
Streptomyces ambofaciens M27245 446 219 49% PDF | Text
Streptomyces bikiniensis X79851 445 192 43% PDF | Text
Streptomyces bluensis X79324 445 206 46% PDF | Text
Streptomyces bottropensis D63868 446 205 46% PDF | Text
Streptomyces brasiliensis X53162 335 152 45% PDF | Text
Streptomyces caelestis X80824 445 223 50% PDF | Text
Streptomyces coelicolor Y00411 441 192 44% PDF | Text
Streptomyces diastaticus X53161 302 150 50% PDF | Text
Streptomyces diastatochromogenes D63867 446 199 45% PDF | Text
Streptomyces espinosus X80826 444 187 42% PDF | Text
Streptomyces eurythermus D63870 445 215 48% PDF | Text
Streptomyces felleus Z76681 426 189 44% PDF | Text
Streptomyces galbus X79325 442 175 40% PDF | Text
Streptomyces glaucescens X79322 444 205 46% PDF | Text
Streptomyces gougerotii Z76687 427 211 49% PDF | Text
Streptomyces griseus X61478 443 152 34% PDF | Text
Streptomyces hygroscopicus X79853 444 177 40% PDF | Text
Streptomyces intermedius Z76686 425 210 49% PDF | Text
Streptomyces lavendulae X53173 318 185 58% PDF | Text
Streptomyces limosus Z76679 426 189 44% PDF | Text
Streptomyces lincolnensis X79854 445 169 38% PDF | Text
Streptomyces macrosporus Z68099 431 211 49% PDF | Text
Streptomyces mashuensis X79323 441 300 68% PDF | Text
Streptomyces megasporus Z68100 436 212 49% PDF | Text
Streptomyces neyagawaensis D63869 446 183 41% PDF | Text
Streptomyces nodosus AF114033 445 192 43% PDF | Text
Streptomyces odorifer Z76682 427 189 44% PDF | Text
Streptomyces ornatus X79326 441 140 32% PDF | Text
Streptomyces pseudogriseolus X80827 444 205 46% PDF | Text
Streptomyces purpureus X53170 304 126 41% PDF | Text
Streptomyces rimosus X62884 438 187 43% PDF | Text
Streptomyces rutgersensis Z76688 427 211 49% PDF | Text
Streptomyces sampsonii D63871 446 196 44% PDF | Text
Streptomyces scabiei D63862 448 204 46% PDF | Text
Streptomyces setonii D63872 446 195 44% PDF | Text
Streptomyces sp. D63866 445 267 60% PDF | Text
Streptomyces subrutilus X80825 444 187 42% PDF | Text
Streptomyces tendae D63873 445 206 46% PDF | Text
Streptomyces thermodiastaticus Z68101 428 190 44% PDF | Text
Streptomyces thermolineatus Z68097 432 179 41% PDF | Text
Streptomyces thermoviolaceus Z68096 432 205 47% PDF | Text
Streptomyces thermovulgaris Z68098 436 225 52% PDF | Text
Synechococcus sp. PCC 6301 X03538 429 189 44% PDF | Text
Synechocystis sp. PCC 6803 D64000 D90916 432 184 43% PDF | Text
Thermomicrobium roseum M34115 442 197 45% PDF | Text
Thermotoga maritima M21774 461 280 61% PDF | Text
Thermus aquaticus L09663 428 259 61% PDF | Text
Thermus thermophilus X07998 445 243 55% PDF | Text
Treponema pallidum (rRNA A) AE001204 455 225 49% PDF | Text
Tropheryma whipplei X99636 444 229 52% PDF | Text
Ureaplasma urealyticum AE002112 433 263 61% PDF | Text
Vibrio cholerae X76337 444 244 55% PDF | Text
Vibrio parahaemolyticus X56580 417 143 34% PDF | Text
Xanthomonas albilineans X95918 434 173 40% PDF | Text
Xanthomonas campestris NPA 423 214 51% NPA
Xylella fastidiosa AE003861 448 170 38% PDF | Text
Yersinia pestis L37604 423 217 51% PDF | Text
Yersinia pseudotuberculosis Z21939 434 238 55% PDF | Text
Eukaryotic Chloroplast
Apodanthes sp. NPA 416 198 48% NPA
Astasia longa X14386 428 138 32% PDF | Text
Babesia bovis U06105 398 165 41% PDF | Text
Chlamydomonas humicola AF374186 368 152 41% PDF | Text
Chlamydomonas reinhardtii J01395 418 222 53% PDF | Text
Chlorella vulgaris AB001684 431 304 71% PDF | Text
Corethron criophilum NPA 412 200 49% NPA
Cryptomonas sp. X56805 421 157 37% PDF | Text
Cyanidium caldarium X52985 421 174 41% PDF | Text
Cyanophora paradoxa X81840 428 212 50% PDF | Text
Cynomorium coccineum U67743 401 99 25% PDF | Text
Cytinus ruber U47845 413 151 37% PDF | Text
Emiliania huxleyi X82156 413 257 62% PDF | Text
Euglena gracilis X12890 V00159 425 79 19% PDF | Text
Glaucocystis nostochinearum X82496 427 231 54% PDF | Text
Gloeochaete wittrockiana X82495 428 214 50% PDF | Text
Heterosigma akashiwo M82860 428 172 40% PDF | Text
Hydnora africana U67745 401 183 46% PDF | Text
Marchantia polymorpha X04465 410 219 53% PDF | Text
Mitrastema yamamotoi U67742 393 108 27% PDF | Text
Nicotiana tabacum V00165 414 146 35% PDF | Text
Palmaria palmata Z18289 411 175 43% PDF | Text
Pilostyles thurberi U67741 378 117 31% PDF | Text
Plasmodium falciparum (plastid-like) X57167 X95275 409 103 25% PDF | Text
Plasmodium vivax AF040974 260 149 57% PDF | Text
Polytoma obtusum AF374187 368 128 35% PDF | Text
Polytoma oviforme AF374188 370 236 64% PDF | Text
Polytoma uvella AF374189 437 126 29% PDF | Text
Pylaiella littoralis X14873 416 117 28% PDF | Text
Ricinus communis L37580 407 146 36% PDF | Text
Skeletonema pseudocostatum X82155 413 212 51% PDF | Text
Toxoplasma gondii U87145 420 135 32% PDF | Text
Zea mays Z00028 423 168 40% PDF | Text
Eukaryotic Mitochondrion
Acanthamoeba castellanii U03732 405 127 31% PDF | Text
Afrixalus fornasini NPA 209 65 31% NPA
Albinaria caerulea X83390 178 40 22% PDF | Text
Alligator mississippiensis L28074 208 54 26% PDF | Text
Amblysomus hottentotus M95108 229 62 27% PDF | Text
Anas platyrhynchos L16770 233 34 15% PDF | Text
Anopheles gambiae L20934 199 47 24% PDF | Text
Anopheles quadrimaculatus L04272 197 58 29% PDF | Text
Antilocapra americana M55540 246 102 41% PDF | Text
Apis mellifera L06178 S51650 184 27 15% PDF | Text
Artemia franciscana X69067 169 9 5% PDF | Text
Ascaris suum X54253 158 47 30% PDF | Text
Aspergillus nidulans J01393 387 116 30% PDF | Text
Asterina pectinifera D16387 201 68 34% PDF | Text
Balaenoptera musculus X72204 232 106 46% PDF | Text
Bos taurus J01394 V00654 229 104 45% PDF | Text
Bufo boreas boreas Thesis, Goebel A. 217 20 9% PDF | Text
Bufo peltocephalus Thesis, Goebel A. 214 93 43% PDF | Text
Caenorhabditis elegans X54252 166 40 24% PDF | Text
Cafeteria roenbergensis AF193903 417 125 30% PDF | Text
Ceratophrys sp. Thesis, Goebel A. 203 68 33% PDF | Text
Chlamydomonas eugametos AF008237 340 138 41% PDF | Text
Chlamydomonas reinhardtii X54860 272 93 34% PDF | Text
Chondrus crispus Z30950 Z47547 370 98 26% PDF | Text
Chorthippus parallelus ESC X95574 189 28 15% PDF | Text
Chorthippus parallelus NOR X95575 189 28 15% PDF | Text
Chrysodidymus synuroideus NPA 427 146 34% NPA
Chrysodidymus synuroideus mg AF222718 443 175 40% PDF | Text
Coscoroba coscoroba S76216 236 81 34% PDF | Text
Coturnix coturnix X57245 218 101 46% PDF | Text
Crithidia fasciculata X02548 55 17 31% PDF | Text
Crossostoma lacustre M91245 236 121 51% PDF | Text
Cygnus melancoryphus S76217 239 86 36% PDF | Text
Cyprinus carpio X61010 228 94 41% PDF | Text
Damaliscus pygargus M86499 228 111 49% PDF | Text
Daphnia pulex Z15015 183 19 10% PDF | Text
Dictyostelium discoideum D16466 353 114 32% PDF | Text
Didelphis virginiana Z29573 231 91 39% PDF | Text
Drosophila teissieri X54011 198 40 20% PDF | Text
Drosophila virilis X05914 222 37 17% PDF | Text
Drosophila yakuba X03240 198 40 20% PDF | Text
Eleutherodactylus coqui NPA 184 57 31% NPA
Equus caballus X79547 229 73 32% PDF | Text
Farfantepenaeus notialis X84357 209 41 20% PDF | Text
Felis catus U20753 227 66 29% PDF | Text
Gallus gallus X52392 223 69 31% PDF | Text
Glycine max M16859 414 82 20% PDF | Text
Harpactes ardens U94810 214 59 28% PDF | Text
Harpochytrium sp. JEL94 AY182005 322 119 37% PDF | Text
Herpetomonas megaseliae U01006 34 5 15% PDF | Text
Homo sapiens J01415 236 95 40% PDF | Text
Katharina tunicata U09810 178 37 21% PDF | Text
Latimeria chalumnae Z21921 212 50 24% PDF | Text
Leishmania tarentolae M10126 55 9 16% PDF | Text
Locusta migratoria X80245 178 14 8% PDF | Text
Loxodonta africana U60182 D50847 228 56 25% PDF | Text
Lumbricus terrestris U24570 172 36 21% PDF | Text
Lutreolina crassicaudata U33494 238 84 35% PDF | Text
Macropus giganteus X86941 228 84 37% PDF | Text
Magicicada tredecim NPA 170 15 9% NPA
Marchantia polymorpha M68292 407 154 38% PDF | Text
Metridium senile S75445 280 76 27% PDF | Text
Monosiga brevicollis AF538053 377 114 30% PDF | Text
Mus musculus J01420 225 89 40% PDF | Text
Muscardinus avellanarius X84384 230 92 40% PDF | Text
Mytilus edulis M83756 197 44 22% PDF | Text
Nephroselmis olivacea AF110138 423 161 38% PDF | Text
Neurospora crassa L33367 330 115 35% PDF | Text
Ochromonas danica AF287134 440 126 29% PDF | Text
Oenothera berteriana X61277 412 107 26% PDF | Text
Oncorhynchus mykiss L29771 226 73 32% PDF | Text
Ornithorhynchus anatinus U33498 X83427 222 52 23% PDF | Text
Pan troglodytes D38113 230 63 27% PDF | Text
Paracentrotus lividus J04815 202 62 31% PDF | Text
Paramecium tetraurelia K01751 351 47 13% PDF | Text
Pedinomonas minor AF116775 326 79 24% PDF | Text
Penicillium chrysogenum Z23072 345 129 37% PDF | Text
Petromyzon marinus U11880 204 49 24% PDF | Text
Phalanger orientalis U33496 226 68 30% PDF | Text
Phascogale tapoatafa U33497 242 67 28% PDF | Text
Phoca vitulina X63726 225 52 23% PDF | Text
Physarum polycephalum X75592 398 69 17% PDF | Text
Phytophthora infestans U17009 429 181 42% PDF | Text
Pichia canadensis D49702 D31785 318 101 32% PDF | Text
Podospora anserina X14734 347 96 28% PDF | Text
Porphyra purpurea AF114794 377 136 36% PDF | Text
Protopterus dolloi L42813 223 59 26% PDF | Text
Prototheca wickerhamii X15435 441 226 51% PDF | Text
Puma concolor U33495 225 71 32% PDF | Text
Pylaiella littoralis X14874 364 80 22% PDF | Text
Rana catesbeiana X12841 227 111 49% PDF | Text
Rattus norvegicus J01438 222 51 23% PDF | Text
Reclinomonas americana AF007261 468 302 65% PDF | Text
Rhizopus stolonifer NPA 384 231 60% NPA
Rhodomonas salina AF288090 407 139 34% PDF | Text
Saccharomyces cerevisiae V00704 373 145 39% PDF | Text
Salmo salar U12143 226 77 34% PDF | Text
Sceloporus undulatus L28075 215 92 43% PDF | Text
Schizosaccharomyces pombe X15738 382 119 31% PDF | Text
Scyliorhinus canicula Y16067 225 67 30% PDF | Text
Secale cereale Z14059 414 71 17% PDF | Text
Sphenodon punctatus L28076 208 67 32% PDF | Text
Spizellomyces punctatus AF404303 324 121 37% PDF | Text
Stenella coeruleoalba X78169 229 57 25% PDF | Text
Suillus sinuspaulianus L47584 515 149 29% PDF | Text
Tetrahymena pyriformis M12714 372 161 43% PDF | Text
Trachemys scripta L28077 207 86 42% PDF | Text
Triticum aestivum Z14078 414 124 30% PDF | Text
Trypanosoma brucei X02547 59 0 0% PDF | Text
Williopsis saturnus var. mrakii X71392 324 110 34% PDF | Text
Xenopus laevis M27605 229 92 40% PDF | Text
Zea mays X00794 426 139 33% PDF | Text
Eukaryotic Nuclear
Acanthamoeba castellanii U07413 490 124 25% PDF | Text
Agmasoma penaei NPA 280 154 55% NPA
Ahnfeltia plicata Z14139 444 156 35% NPA
Alexandrium fundyense U09048 393 83 21% PDF | Text
Amblyospora sp. U68474 376 97 26% PDF | Text
Ameson michaelis L15741 328 50 15% PDF | Text
Androctonus australis X77908 423 162 38% PDF | Text
Antonospora scoticae AF024655 364 82 23% PDF | Text
Artemia salina X01723 423 118 28% PDF | Text
Audouinella dasyae L26181 448 173 39% NPA
Audouinella hermannii AF026040 448 196 44% NPA
Aulacoseira ambigua X85404 441 95 22% PDF | Text
Babesia bigemina X59604 397 125 31% PDF | Text
Bacillidium sp. AF104087 354 111 31% PDF | Text
Balamuthia mandrillaris AF019071 442 149 34% PDF | Text
Balbiania investiens AF132294 427 170 40% NPA
Bangia sp. (Northwest Territories/NWT) AF043355 448 141 31% NPA
Bangiopsis subsimplex AF168627 442 186 42% NPA
Batrachospermum gelatinosum AF026045 444 201 45% NPA
Batrachospermum macrosporum AF026048 442 130 29% NPA
Bonnemaisonia hamifera L26182 442 178 40% NPA
Bostrychia moritziana AF203893 447 145 32% NPA
Candida albicans M60302 450 195 43% PDF | Text
Ceramium rubrum L26183 447 154 34% NPA
Chlorella luteoviridis X73998 435 161 37% PDF | Text
Chondrus crispus Z14140 448 191 43% NPA
Compsopogon coeruleus AF087124 430 137 32% NPA
Corallina officinalis L26184 455 136 30% NPA
Crossodonthina koreana Z36893 421 138 33% PDF | Text
Cryptocercus punctulatus NPA 438 137 31% NPA
Cryptococcus neoformans var. neoformans L05428 448 205 46% PDF | Text
Culicosporella lunata AF027683 377 146 39% PDF | Text
Cyanophora paradoxa X68483 446 164 37% PDF | Text
Cymatosira belgica X85387 441 149 34% PDF | Text
Cyrtohymena citrina AF164135 442 155 35% PDF | Text
Dixonielloa grisea L26187 441 140 32% NPA
Drosophila melanogaster M21017 458 162 35% PDF | Text
Echinococcus granulosus U27015 417 94 23% PDF | Text
Edhazardia aedis AF027684 413 146 35% PDF | Text
Encephalitozoon cuniculi X98467 355 59 17% PDF | Text
Encephalitozoon hellem AF118143 356 59 17% PDF | Text
Encephalitozoon sp. L16867 349 56 16% PDF | Text
Endoreticulatus schubergi L39109 346 91 26% PDF | Text
Engelmanniella mobilis AF164134 442 168 38% PDF | Text
Enterocytozoonidae gen. sp. AF201911 333 148 44% PDF | Text
Erythrotrichia carnea L26189 456 172 38% NPA
Euglypha rotunda X77692 441 196 44% PDF | Text
Euplotes aediculatus M14590 433 111 26% PDF | Text
Flabelliforma montana AJ252962 270 71 26% PDF | Text
Fragaria x ananassa X15590 444 123 28% PDF | Text
Gastrostyla steinei AF164133 441 145 33% PDF | Text
Gelidium vagum L26190 445 172 39% NPA
Genicularia spirotaenia X74753 440 165 38% PDF | Text
Giardia ardeae Z17210 352 101 29% PDF | Text
Giardia intestinalis X52949 355 65 18% PDF | Text
Giardia muris X65063 344 94 27% PDF | Text
Glaucocystis nostochinearum X70803 445 151 34% PDF | Text
Gloeochaete wittrockiana X81901 444 171 39% PDF | Text
Glomus intraradices X58725 394 174 44% PDF | Text
Glugea atherinae U15987 345 133 39% PDF | Text
Glugea stephani AF056015 288 128 44% PDF | Text
Gracilariopsis sp. M33639 448 156 35% PDF | Text
Halymenia plana U33133 447 174 39% NPA
Hexamita sp. Z17224 358 101 28% PDF | Text
Hildenbrandia rubra L19345 449 157 35% PDF | Text
Homo sapiens K03432 466 142 30% PDF | Text
Ichthyosporidium sp. L39110 335 92 27% PDF | Text
Janacekia debaisieuxi AJ252950 360 113 31% PDF | Text
Lecanora dispersa NPA 350 85 24% NPA
Lilioceris lilii NPA 446 206 46% NPA
Loma acerinae AJ252951 351 117 33% PDF | Text
Mastigamoeba balamuthi L23799 490 223 46% PDF | Text
Microgemma sp. AJ252952 343 129 38% PDF | Text
Microsporidium 57864 U90885 355 90 25% PDF | Text
Mus musculus X00686 448 150 33% PDF | Text
Mytilus edulis L24489 433 168 39% PDF | Text
Naegleria gruberi Thesis, Mullican J. 390 101 26% NPA
Nemalion helminthoides L26196 447 197 44% NPA
Nemalionopsis shawii AF506272 439 192 44% PDF | Text
Nosema algerae AF069063 394 105 27% PDF | Text
Nosema apis U97150 344 106 31% PDF | Text
Nosema necatrix U11051 322 71 22% PDF | Text
Okanagana utahensis U06478 457 178 39% PDF | Text
Onychodromus quadricornutus X53485 440 113 26% PDF | Text
Ophiopholis aculeata L28056 390 92 24% NPA
Oxytricha granulifera AF164122 439 168 38% PDF | Text
Oxytricha longa AF164125 441 171 39% PDF | Text
Palmaria palmata Z14142 447 187 42% NPA
Paraurostyla weissei AF164127 441 154 35% PDF | Text
Paruroleptus lepisma AF164132 440 116 26% PDF | Text
Paulinella chromatophora X81811 443 171 39% PDF | Text
Placopecten magellanicus X53899 428 126 29% PDF | Text
Plasmodium falciparum (A gene) M19172 503 237 47% PDF | Text
Plasmodium falciparum (S gene) M19173 492 135 27% PDF | Text
Plasmodium vivax (A gene) U07367 488 213 44% PDF | Text
Plasmodium vivax (O gene) U93095 505 193 38% PDF | Text
Plasmodium vivax (S gene) U07368 509 185 36% PDF | Text
Pleistophora hippoglossoideos AJ252953 361 112 31% PDF | Text
Pleistophora sp. U10342 329 109 33% PDF | Text
Pleurotricha lanceolota AF164128 440 137 31% PDF | Text
Plocamiocolax pulvinata U09618 453 170 38% NPA
Polydispyrenia simulii AJ252960 333 84 25% PDF | Text
Porphyra miniata AF175540 444 95 21% NPA
Porphyridium aerugineum L27635 442 159 36% NPA
Reticulitermes flavipes NPA 447 173 39% NPA
Rhodella maculata U21217 436 155 36% NPA
Rhodochaete parvula AF139462 436 180 41% NPA
Rhodogorgon carriebowensis AF006089 467 191 41% NPA
Rhodymenia leptophylla U09621 449 162 36% NPA
Saccharomyces cerevisiae U53879 451 186 41% PDF | Text
Spraguea lophii AF033197 345 94 27% PDF | Text
Staurastrum sp. M752 X74752 435 141 32% PDF | Text
Strongylocentrotus purpuratus L28055 390 124 32% PDF | Text
Stylonychia lemnae AF164124 442 148 33% PDF | Text
Stylonychia mytilus AF164123 441 124 28% PDF | Text
Thalassiosira eccentrica X85396 439 156 36% PDF | Text
Thelohania solenopsae AF031538 384 93 24% PDF | Text
Thelohania sp. AF031537 256 47 18% PDF | Text
Thorea hispida AF506273 437 201 46% PDF | Text
Thorea violacea AF026042 498 180 36% PDF | Text
Thorea violacea AF506274 437 209 48% PDF | Text
Toxoplasma gondii (P) X75453 412 154 37% PDF | Text
Trachipleistophora hominis AJ002605 355 138 39% PDF | Text
Tritrichomonas foetus M81842 397 163 41% PDF | Text
Uroleptus gallina AF164130 441 173 39% PDF | Text
Uroleptus pisces AF164131 441 151 34% PDF | Text
Urostyla grandis AF164129 437 132 30% PDF | Text
Vairimorpha necatrix Y00266 M24612 338 69 20% PDF | Text
Vairimorpha sp. Argentina AF031539 303 85 28% PDF | Text
Vavraia culicis AJ252961 354 107 30% PDF | Text
Visvesvaria acridophagus AF024658 399 155 39% PDF | Text
Weiseria palustris AF132544 369 112 30% PDF | Text
Xenopus laevis X04025 429 151 35% PDF | Text
  1. Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
  2. Secondary structure diagrams available in PDF and text formats. The pdf versions of the diagrams have correctly predicted base-pairs indicated with red tick-marks.
  3. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.