Accession Comparative Base Pairs1 Predicted Correctly1 Accuracy Diagrams2
Archaea
Aeropyrum pernix AP000062 451 292 65% PDF | Text
Archaeoglobus fulgidus X05567 AE000965 448 256 57% PDF | Text
Haloarcula marismortui rrnA X61688 438 254 58% PDF | Text
Haloarcula marismortui rrnB X61689 440 296 67% PDF | Text
Halobacterium sp. AE005128 440 225 51% PDF | Text
Haloferax volcanii K00421 439 336 77% PDF | Text
Methanobacterium formicicum M36508 438 309 71% PDF | Text
Methanococcus jannaschii U67517 L77117 445 244 55% PDF | Text
Methanococcus vannielii M36507 437 230 53% PDF | Text
Methanospirillum hungatei M60880 432 272 63% PDF | Text
Methanothermobacter thermautotrophicus AE000930 442 275 62% PDF | Text
Natronobacterium innermongoliae AF009601 442 322 73% PDF | Text
Natronorubrum bangense Y14028 441 282 64% PDF | Text
Pyrococcus abyssi AJ248283 453 308 68% PDF | Text
Pyrococcus furiosus U20163 444 275 62% PDF | Text
Pyrococcus horikoshii AP000001 452 308 68% PDF | Text
Pyrodictium occultum M21087 447 258 58% PDF | Text
Sulfolobus acidocaldarius D14876 446 257 58% PDF | Text
Sulfolobus P2 NPA3 447 228 51% NPA
Sulfolobus solfataricus X03235 446 257 58% PDF | Text
Thermococcus celer M21529 447 330 74% PDF | Text
Thermoplasma acidophilum AL445067 M38637 440 266 60% PDF | Text
Thermoproteus tenax M35966 456 296 65% PDF | Text
Bacteria
Acidobacterium capsulatum D26171 401 176 44% PDF | Text
Acinetobacter calcoaceticus M34139 434 186 43% PDF | Text
Actinomyces israelii X82450 407 102 25% PDF | Text
Aeromonas hydrophila X60407 446 215 48% PDF | Text
Agrobacterium tumefaciens M11223 429 239 56% PDF | Text
Allochromatium vinosum M26629 423 178 42% PDF | Text
Anabaena sp. X59559 432 219 51% PDF | Text
Aquifex aeolicus AE000709 AE000751 473 280 59% PDF | Text
Aquifex pyrophilus M83548 468 282 60% PDF | Text
Arthrobacter globiformis M23411 446 206 46% PDF | Text
Azorhizobium caulinodans D11342 424 182 43% PDF | Text
Bacillus anthracis X55059 393 218 55% PDF | Text
Bacillus cereus X55060 407 277 68% PDF | Text
Bacillus halodurans AB013373 450 306 68% PDF | Text
Bacillus subtilis K00637 451 241 53% PDF | Text
Bacteroides fragilis M61006 442 290 66% PDF | Text
Bartonella bacilliformis Z11683 408 193 47% PDF | Text
Bartonella henselae M73229 410 197 48% PDF | Text
Bartonella quintana M11927 429 207 48% PDF | Text
Beggiatoa sp. 1401-13 L40997 428 241 56% PDF | Text
Bordetella bronchiseptica U04948 448 298 67% PDF | Text
Bordetella parapertussis U04949 421 265 63% PDF | Text
Bordetella pertussis U04950 420 252 60% PDF | Text
Borrelia burgdorferi M88329 455 225 49% PDF | Text
Borrelia hermsii U42292 450 228 51% PDF | Text
Brachyspira hyodysenteriae U23035 421 196 47% PDF | Text
Bradyrhizobium japonicum Z35330 432 215 50% PDF | Text
Brevinema andersonii L31543 408 195 48% PDF | Text
Brucella melitensis L26166 400 207 52% PDF | Text
Buchnera sp. APS AP000398 420 237 56% PDF | Text
Burkholderia mallei S55008 376 170 45% PDF | Text
Burkholderia sp. U37342 432 241 56% PDF | Text
Campylobacter jejuni Z29326 442 274 62% PDF | Text
Campylobacter sputorum X67775 420 209 50% PDF | Text
Chlamydia muridarum AE002280 458 237 52% PDF | Text
Chlamydia trachomatis U68443 458 238 52% PDF | Text
Chlamydophila pneumoniae L06108 460 229 50% PDF | Text
Chlamydophila psittaci U68447 456 230 50% PDF | Text
Chlorobium vibrioforme M62791 430 192 45% PDF | Text
Chlorogloeopsis sp. PCC 7518 X68780 432 204 47% PDF | Text
Chromohalobacter marismortui X87222 431 195 45% PDF | Text
Citrobacter freundii M59291 416 170 41% PDF | Text
Clostridium botulinum F L37593 421 266 63% PDF | Text
Clostridium difficile X73450 423 214 51% PDF | Text
Clostridium innocuum M23732 440 257 58% PDF | Text
Clostridium perfringens M69264 438 174 40% PDF | Text
Clostridium tetani X74770 436 237 54% PDF | Text
Comamonas testosteroni M11224 441 211 48% PDF | Text
Corynebacterium diphtheriae X84248 432 155 36% PDF | Text
Coxiella burnetii M21291 418 208 50% PDF | Text
Cristispira CP1 U42638 430 167 39% PDF | Text
Deferribacter thermophilus U75602 460 265 58% PDF | Text
Deinococcus radiodurans M21413 437 273 62% PDF | Text
Desulfovibrio desulfuricans M34113 447 205 46% PDF | Text
Dichelobacter nodosus M35016 448 247 55% PDF | Text
Edwardsiella tarda AF015259 402 247 61% PDF | Text
Enterococcus faecalis Y18293 407 262 64% PDF | Text
Enterococcus faecium AF070223 435 271 62% PDF | Text
environ.Eubacteria clone W15 NPA 407 262 64% NPA
Epulopiscium sp. M99572 412 131 32% PDF | Text
Erysipelothrix rhusiopathiae M23728 430 259 60% PDF | Text
Escherichia coli J01695 457 242 53% PDF | Text
Eubacterium brachy Z36272 425 265 62% PDF | Text
Francisella tularensis Z21931 439 171 39% PDF | Text
Frankia sp. M55343 442 200 45% PDF | Text
Fusobacterium necrophorum X74408 423 174 41% PDF | Text
Fusobacterium nucleatum subsp. nucleatum M58683 430 284 66% PDF | Text
Gemmata obscuriglobus X56305 404 223 55% PDF | Text
Geotoga subterranea L10659 434 203 47% PDF | Text
Gluconacetobacter liquefaciens X75617 434 160 37% PDF | Text
Haemobartonella felis U95297 382 135 35% PDF | Text
Haemophilus influenzae X87977 407 165 41% PDF | Text
Haemophilus influenzae (operons A-F) U32741 U32744 U32755 U32847 U32697 U32708 447 199 45% PDF | Text
Halomonas halodenitrificans L04942 440 148 34% PDF | Text
Helicobacter pylori M88157 419 195 47% PDF | Text
Heliobacterium chlorum M11212 436 167 38% PDF | Text
Holophaga foetida X77215 441 217 49% PDF | Text
Isosphaera pallida X64372 398 174 44% PDF | Text
Klebsiella pneumoniae X80684 404 182 45% PDF | Text
Lactobacillus acidophilus M58802 430 231 54% PDF | Text
Lactococcus lactis subsp. lactis AE006456 451 275 61% PDF | Text
Legionella pneumophila M59157 425 191 45% PDF | Text
Leptonema illini M88719 442 218 49% PDF | Text
Leptospira interrogans X17547 440 247 56% PDF | Text
Leptospirillum ferriphilum AF356830 424 199 47% PDF | Text
Listeria monocytogenes M58822 429 246 57% PDF | Text
Mesorhizobium loti AP003001 429 199 46% PDF | Text
Methylobacterium sp. Z23160 409 203 50% PDF | Text
Methylococcus capsulatus X72771 420 135 32% PDF | Text
Micrococcus luteus M38242 420 143 34% PDF | Text
Microcystis aeruginosa U03402 Z28699 406 239 59% PDF | Text
Mycobacterium avium X52918 415 144 35% PDF | Text
Mycobacterium leprae X56657 452 97 21% PDF | Text
Mycobacterium tuberculosis X52917 418 94 22% PDF | Text
Mycoplasma capricolum X00921 437 209 48% PDF | Text
Mycoplasma gallisepticum M22441 434 236 54% PDF | Text
Mycoplasma genitalium U39694 437 220 50% PDF | Text
Mycoplasma hyopneumoniae Y00149 443 303 68% PDF | Text
Mycoplasma mycoides M23943 376 130 35% PDF | Text
Mycoplasma pneumoniae M29061 420 229 55% PDF | Text
Myxococcus xanthus M34114 446 224 50% PDF | Text
Neisseria gonorrhoeae X07714 443 251 57% PDF | Text
Neisseria meningitidis AE002364 444 264 59% PDF | Text
Nocardia asteroides X80606 423 156 37% PDF | Text
Oscillatoria agardhii X84811 420 271 65% PDF | Text
Pasteurella multocida M35018 435 184 42% PDF | Text
Petrotoga miotherma L10657 364 213 59% PDF | Text
Pirellula marina X62912 409 129 32% PDF | Text
Pirellula staleyi M34126 433 195 45% PDF | Text
Planctomycetaceae Schlesner 670 X81948 427 227 53% PDF | Text
Plesiomonas shigelloides X74688 411 201 49% PDF | Text
Pleurocapsa sp. X78681 419 197 47% PDF | Text
Porphyromonas gingivalis L16492 419 151 36% PDF | Text
Proteus vulgaris X07652 456 227 50% PDF | Text
Pseudomonas aeruginosa M34133 424 214 50% PDF | Text
Pseudomonas putida D84020 448 223 50% PDF | Text
Pseudomonas sp. U37339 429 231 54% PDF | Text
Psychrobacter pacificensis AB016054 448 199 44% PDF | Text
Rhodobium orientis D30792 407 224 55% PDF | Text
Rhodoblastus acidophilus M34128 414 210 51% PDF | Text
Rhodococcus erythropolis AF001265 442 186 42% PDF | Text
Rickettsia bellii U11014 439 244 56% PDF | Text
Rickettsia prowazekii M21789 439 245 56% PDF | Text
Rickettsia rickettsii L36217 417 223 53% PDF | Text
Salmonella typhimurium X80681 447 216 48% PDF | Text
Serratia marcescens M59160 431 197 46% PDF | Text
Shewanella putrefaciens X81623 446 206 46% PDF | Text
Shigella dysenteriae X96966 428 194 45% PDF | Text
Spirochaeta aurantia M57740 436 251 58% PDF | Text
Staphylococcus aureus L36472 446 232 52% PDF | Text
Streptobacillus moniliformis Z35305 428 141 33% PDF | Text
Streptococcus mutans X58303 348 203 58% PDF | Text
Streptococcus pneumoniae X58312 349 236 68% PDF | Text
Streptococcus pyogenes X59029 333 119 36% PDF | Text
Streptomyces acidiscabies D63865 446 234 52% PDF | Text
Streptomyces albidoflavus Z76676 426 200 47% PDF | Text
Streptomyces albus X53163 341 160 47% PDF | Text
Streptomyces ambofaciens M27245 446 204 46% PDF | Text
Streptomyces bikiniensis X79851 445 196 44% PDF | Text
Streptomyces bluensis X79324 445 206 46% PDF | Text
Streptomyces bottropensis D63868 446 177 40% PDF | Text
Streptomyces brasiliensis X53162 335 167 50% PDF | Text
Streptomyces caelestis X80824 445 212 48% PDF | Text
Streptomyces coelicolor Y00411 441 199 45% PDF | Text
Streptomyces diastaticus X53161 302 163 54% PDF | Text
Streptomyces diastatochromogenes D63867 446 212 48% PDF | Text
Streptomyces espinosus X80826 444 188 42% PDF | Text
Streptomyces eurythermus D63870 445 211 47% PDF | Text
Streptomyces felleus Z76681 426 200 47% PDF | Text
Streptomyces galbus X79325 442 194 44% PDF | Text
Streptomyces glaucescens X79322 444 287 65% PDF | Text
Streptomyces gougerotii Z76687 427 184 43% PDF | Text
Streptomyces griseus X61478 443 173 39% PDF | Text
Streptomyces hygroscopicus X79853 444 198 45% PDF | Text
Streptomyces intermedius Z76686 425 208 49% PDF | Text
Streptomyces lavendulae X53173 318 195 61% PDF | Text
Streptomyces limosus Z76679 426 200 47% PDF | Text
Streptomyces lincolnensis X79854 445 183 41% PDF | Text
Streptomyces macrosporus Z68099 431 198 46% PDF | Text
Streptomyces mashuensis X79323 441 290 66% PDF | Text
Streptomyces megasporus Z68100 436 251 58% PDF | Text
Streptomyces neyagawaensis D63869 446 190 43% PDF | Text
Streptomyces nodosus AF114033 445 195 44% PDF | Text
Streptomyces odorifer Z76682 427 200 47% PDF | Text
Streptomyces ornatus X79326 441 140 32% PDF | Text
Streptomyces pseudogriseolus X80827 444 287 65% PDF | Text
Streptomyces purpureus X53170 304 126 41% PDF | Text
Streptomyces rimosus X62884 438 194 44% PDF | Text
Streptomyces rutgersensis Z76688 427 184 43% PDF | Text
Streptomyces sampsonii D63871 446 292 65% PDF | Text
Streptomyces scabiei D63862 448 180 40% PDF | Text
Streptomyces setonii D63872 446 200 45% PDF | Text
Streptomyces sp. D63866 445 214 48% PDF | Text
Streptomyces subrutilus X80825 444 197 44% PDF | Text
Streptomyces tendae D63873 445 221 50% PDF | Text
Streptomyces thermodiastaticus Z68101 428 184 43% PDF | Text
Streptomyces thermolineatus Z68097 432 200 46% PDF | Text
Streptomyces thermoviolaceus Z68096 432 198 46% PDF | Text
Streptomyces thermovulgaris Z68098 436 204 47% PDF | Text
Synechococcus sp. PCC 6301 X03538 429 217 51% PDF | Text
Synechocystis sp. PCC 6803 D64000 D90916 432 150 35% PDF | Text
Thermomicrobium roseum M34115 442 207 47% PDF | Text
Thermotoga maritima M21774 461 286 62% PDF | Text
Thermus aquaticus L09663 428 253 59% PDF | Text
Thermus thermophilus X07998 445 266 60% PDF | Text
Treponema pallidum (rRNA A) AE001204 455 235 52% PDF | Text
Tropheryma whipplei X99636 444 249 56% PDF | Text
Ureaplasma urealyticum AE002112 433 260 60% PDF | Text
Vibrio cholerae X76337 444 251 57% PDF | Text
Vibrio parahaemolyticus X56580 417 171 41% PDF | Text
Xanthomonas albilineans X95918 434 172 40% PDF | Text
Xanthomonas campestris NPA 423 156 37% NPA
Xylella fastidiosa AE003861 448 170 38% PDF | Text
Yersinia pestis L37604 423 233 55% PDF | Text
Yersinia pseudotuberculosis L21939 434 231 53% PDF | Text
Eukaryotic Chloroplast
Apodanthes sp NPA 416 198 48% NPA
Astasia longa X14386 428 193 45% PDF | Text
Babesia bovis U06105 398 200 50% PDF | Text
Chlamydomonas humicola AF374186 368 245 67% PDF | Text
Chlamydomonas reinhardtii J01395 418 231 55% PDF | Text
Chlorella vulgaris AB001684 431 304 71% PDF | Text
Corethron criophilum NPA 412 189 46% NPA
Cryptomonas sp. X56805 421 157 37% PDF | Text
Cyanidium caldarium X52985 421 221 52% PDF | Text
Cyanophora paradoxa X81840 428 236 55% PDF | Text
Cynomorium coccineum U67743 401 107 27% PDF | Text
Cytinus ruber U47845 413 189 46% PDF | Text
Emiliania huxleyi X82156 413 215 52% PDF | Text
Euglena gracilis X12890 V00159 425 81 19% PDF | Text
Glaucocystis nostochinearum X82496 427 234 55% PDF | Text
Gloeochaete wittrockiana X82495 428 208 49% PDF | Text
Heterosigma akashiwo M82860 428 264 62% PDF | Text
Hydnora africana U67745 401 232 58% PDF | Text
Marchantia polymorpha X04465 410 241 59% PDF | Text
Mitrastema yamamotoi U67742 393 108 27% PDF | Text
Nicotiana tabacum V00165 414 164 40% PDF | Text
Palmaria palmata Z18289 411 179 44% PDF | Text
Pilostyles thurberi U67741 378 154 41% PDF | Text
Plasmodium falciparum (plastid-like) X57167 X95275 409 109 27% PDF | Text
Plasmodium vivax AF040974 260 99 38% PDF | Text
Polytoma obtusum AF374187 368 149 40% PDF | Text
Polytoma oviforme AF374188 370 236 64% PDF | Text
Polytoma uvella AF374189 437 140 32% PDF | Text
Pylaiella littoralis X14873 416 126 30% PDF | Text
Ricinus communis L37580 407 173 43% PDF | Text
Skeletonema pseudocostatum X82155 413 168 41% PDF | Text
Toxoplasma gondii U87145 420 182 43% PDF | Text
Zea mays Z00028 423 173 41% PDF | Text
Eukaryotic Mitochondrion
Acanthamoeba castellanii U03732 405 131 32% PDF | Text
Afrixalus fornasini NPA 209 50 24% NPA
Albinaria caerulea X83390 178 61 34% PDF | Text
Alligator mississippiensis L28074 208 66 32% PDF | Text
Amblysomus hottentotus M95108 229 62 27% PDF | Text
Anas platyrhynchos L16770 233 60 26% PDF | Text
Anopheles gambiae L20934 198 47 24% PDF | Text
Anopheles quadrimaculatus L04272 198 53 27% PDF | Text
Antilocapra americana M55540 246 103 42% PDF | Text
Apis mellifera L06178 S51650 184 34 18% PDF | Text
Artemia franciscana X69067 169 9 5% PDF | Text
Ascaris suum X54253 158 21 13% PDF | Text
Aspergillus nidulans J01393 387 116 30% PDF | Text
Asterina pectinifera D16387 201 76 38% PDF | Text
Balaenoptera musculus X72204 232 113 49% PDF | Text
Bos taurus J01394 V00654 229 102 45% PDF | Text
Bufo boreas boreas Thesis, Goebel A. 217 101 47% PDF | Text
Bufo peltocephalus Thesis, Goebel A. 214 104 49% PDF | Text
Caenorhabditis elegans X54252 166 40 24% PDF | Text
Cafeteria roenbergensis AF193903 417 126 30% PDF | Text
Ceratophrys sp. Thesis, Goebel A. 203 82 40% PDF | Text
Chlamydomonas eugametos AF008237 340 166 49% PDF | Text
Chlamydomonas reinhardtii X54860 272 93 34% PDF | Text
Chondrus crispus Z30950 Z47547 370 100 27% PDF | Text
Chorthippus parallelus ESC X95574 189 45 24% PDF | Text
Chorthippus parallelus NOR X95575 189 45 24% PDF | Text
Chrysodidymus synuroideus NPA 427 151 35% NPA
Chrysodidymus synuroideus mg AF222718 443 157 35% PDF | Text
Coscoroba coscoroba S76216 236 88 37% PDF | Text
Coturnix coturnix X57245 218 70 32% PDF | Text
Crithidia fasciculata X02548 55 8 15% PDF | Text
Crossostoma lacustre M91245 236 100 42% PDF | Text
Cygnus melancoryphus S76217 239 97 41% PDF | Text
Cyprinus carpio X61010 228 125 55% PDF | Text
Damaliscus pygargus M86499 228 46 20% PDF | Text
Daphnia pulex Z15015 183 34 19% PDF | Text
Dictyostelium discoideum D16466 353 126 36% PDF | Text
Didelphis virginiana Z29573 231 82 35% PDF | Text
Drosophila teissieri X54011 198 40 20% PDF | Text
Drosophila virilis X05914 222 27 12% PDF | Text
Drosophila yakuba X03240 198 40 20% PDF | Text
Eleutherodactylus coqui NPA 184 39 21% NPA
Equus caballus X79547 229 103 45% PDF | Text
Farfantepenaeus notialis X84357 209 51 24% PDF | Text
Felis catus U20753 227 71 31% PDF | Text
Gallus gallus X52392 223 57 26% PDF | Text
Glycine max M16859 414 83 20% PDF | Text
Harpactes ardens U94810 214 59 28% PDF | Text
Harpochytrium sp. JEL94 AY182005 322 119 37% PDF | Text
Herpetomonas megaseliae U01006 34 3 9% PDF | Text
Homo sapiens J01415 236 98 42% PDF | Text
Katharina tunicata U09810 178 9 5% PDF | Text
Latimeria chalumnae Z21921 212 62 29% PDF | Text
Leishmania tarentolae M10126 55 12 22% PDF | Text
Locusta migratoria X80245 178 10 6% PDF | Text
Loxodonta africana U60182 D50847 228 59 26% PDF | Text
Lumbricus terrestris U24570 172 32 19% PDF | Text
Lutreolina crassicaudata U33494 238 49 21% PDF | Text
Macropus giganteus X86941 228 81 36% PDF | Text
Magicicada tredecim NPA 170 17 10% NPA
Marchantia polymorpha M68292 407 153 38% PDF | Text
Metridium senile S75445 280 107 38% PDF | Text
Monosiga brevicollis AF538053 377 185 49% PDF | Text
Mus musculus J01420 225 89 40% PDF | Text
Muscardinus avellanarius X84384 230 93 40% PDF | Text
Mytilus edulis M83756 197 43 22% PDF | Text
Nephroselmis olivacea AF110138 423 181 43% PDF | Text
Neurospora crassa L33367 330 71 22% PDF | Text
Ochromonas danica AF287134 440 126 29% PDF | Text
Oenothera berteriana X61277 412 76 18% PDF | Text
Oncorhynchus mykiss L29771 226 67 30% PDF | Text
Ornithorhynchus anatinus U33498 X83427 222 67 30% PDF | Text
Pan troglodytes D38113 230 57 25% PDF | Text
Paracentrotus lividus J04815 202 69 34% PDF | Text
Paramecium tetraurelia K01751 351 55 16% PDF | Text
Pedinomonas minor AF116775 326 88 27% PDF | Text
Penicillium chrysogenum Z23072 345 116 34% PDF | Text
Petromyzon marinus U11880 204 47 23% PDF | Text
Phalanger orientalis U33496 226 48 21% PDF | Text
Phascogale tapoatafa U33497 242 70 29% PDF | Text
Phoca vitulina X63726 225 70 31% PDF | Text
Physarum polycephalum X75592 398 69 17% PDF | Text
Phytophthora infestans U17009 429 204 48% PDF | Text
Pichia canadensis D49702 D31785 318 107 34% PDF | Text
Podospora anserina X14734 347 75 22% PDF | Text
Porphyra purpurea AF114794 377 126 33% PDF | Text
Protopterus dolloi L42813 223 72 32% PDF | Text
Prototheca wickerhamii X15435 441 222 50% PDF | Text
Puma concolor U33495 225 91 40% PDF | Text
Pylaiella littoralis X14874 364 87 24% PDF | Text
Rana catesbeiana X12841 227 82 36% PDF | Text
Rattus norvegicus J01438 222 81 36% PDF | Text
Reclinomonas americana AF007261 468 280 60% PDF | Text
Rhizopus stolonifer NPA 384 222 58% NPA
Rhodomonas salina AF288090 407 107 26% PDF | Text
Saccharomyces cerevisiae V00704 373 116 31% PDF | Text
Salmo salar U12143 226 74 33% PDF | Text
Sceloporus undulatus L28075 215 92 43% PDF | Text
Schizosaccharomyces pombe X15738 382 152 40% PDF | Text
Scyliorhinus canicula Y16067 225 74 33% PDF | Text
Secale cereale Z14059 414 71 17% PDF | Text
Sphenodon punctatus L28076 208 47 23% PDF | Text
Spizellomyces punctatus AF404303 324 110 34% PDF | Text
Stenella coeruleoalba X78169 229 96 42% PDF | Text
Suillus sinuspaulianus L47584 515 147 29% PDF | Text
Tetrahymena pyriformis M12714 372 97 26% PDF | Text
Trachemys scripta L28077 207 49 24% PDF | Text
Triticum aestivum Z14078 414 71 17% PDF | Text
Trypanosoma brucei X02547 59 3 5% PDF | Text
Williopsis saturnus var. mrakii X71392 324 125 39% PDF | Text
Xenopus laevis M27605 229 93 41% PDF | Text
Zea mays X00794 426 128 30% PDF | Text
Eukaryotic Nuclear
Acanthamoeba castellanii U07413 490 145 30% PDF | Text
Agmasoma penaei NPA 280 121 43% NPA
Ahnfeltia plicata Z14139 444 190 43% NPA
Alexandrium fundyense U09048 393 83 21% PDF | Text
Amblyospora sp. U68474 376 95 25% PDF | Text
Ameson michaelis L15741 328 50 15% PDF | Text
Androctonus australis X77908 423 140 33% PDF | Text
Antonospora scoticae AF024655 364 73 20% PDF | Text
Artemia salina X01723 423 128 30% PDF | Text
Audouinella dasyae L26181 448 203 45% NPA
Audouinella hermannii AF026040 448 205 46% NPA
Aulacoseira ambigua X85404 441 97 22% PDF | Text
Babesia bigemina X59604 397 75 19% PDF | Text
Bacillidium sp. AF104087 354 111 31% PDF | Text
Balamuthia mandrillaris AF019071 442 149 34% PDF | Text
Balbiania investiens AF132294 427 168 39% NPA
Bangia sp. (Northwest Territories/NWT) AF043355 448 134 30% NPA
Bangiopsis subsimplex AF168627 442 164 37% NPA
Batrachospermum gelatinosum AF026045 444 152 34% NPA
Batrachospermum macrosporum AF026048 442 142 32% NPA
Bonnemaisonia hamifera L26182 442 170 38% NPA
Bostrychia moritziana AF203893 447 173 39% NPA
Candida albicans M60302 450 190 42% PDF | Text
Ceramium rubrum L26183 447 167 37% NPA
Chlorella luteoviridis X73998 435 150 34% PDF | Text
Chondrus crispus Z14140 448 202 45% NPA
Compsopogon coeruleus AF087124 430 116 27% NPA
Corallina officinalis L26184 455 165 36% NPA
Crossodonthina koreana Z36893 421 139 33% PDF | Text
Cryptocercus punctulatus NPA 438 135 31% NPA
Cryptococcus neoformans var. neoformans L05428 448 216 48% PDF | Text
Culicosporella lunata AF027683 377 146 39% PDF | Text
Cyanophora paradoxa X68483 446 174 39% PDF | Text
Cymatosira belgica X85387 441 132 30% PDF | Text
Cyrtohymena citrina AF164135 442 154 35% PDF | Text
Dixonielloa grisea L26187 441 151 34% NPA
Drosophila melanogaster M21017 458 164 36% PDF | Text
Echinococcus granulosus U27015 417 97 23% PDF | Text
Edhazardia aedis AF027684 413 130 31% PDF | Text
Encephalitozoon cuniculi X98467 355 73 21% PDF | Text
Encephalitozoon hellem AF118143 356 72 20% PDF | Text
Encephalitozoon sp. L16867 349 72 21% PDF | Text
Endoreticulatus schubergi L39109 346 91 26% PDF | Text
Engelmanniella mobilis AF164134 442 185 42% PDF | Text
Enterocytozoonidae gen. sp. AF201911 333 150 45% PDF | Text
Erythrotrichia carnea L26189 456 170 37% NPA
Euglypha rotunda X77692 441 200 45% PDF | Text
Euplotes aediculatus M14590 433 106 24% PDF | Text
Flabelliforma montana AJ252962 270 65 24% PDF | Text
Fragaria x ananassa X15590 444 142 32% PDF | Text
Gastrostyla steinei AF164133 441 154 35% PDF | Text
Gelidium vagum L26190 445 169 38% NPA
Genicularia spirotaenia X74753 440 163 37% PDF | Text
Giardia ardeae Z17210 352 115 33% PDF | Text
Giardia intestinalis X52949 355 83 23% PDF | Text
Giardia muris X65063 344 99 29% PDF | Text
Glaucocystis nostochinearum X70803 445 150 34% PDF | Text
Gloeochaete wittrockiana X81901 444 155 35% PDF | Text
Glomus intraradices X58725 394 168 43% PDF | Text
Glugea atherinae U15987 345 145 42% PDF | Text
Glugea stephani AF056015 288 130 45% PDF | Text
Gracilariopsis sp. M33639 448 207 46% PDF | Text
Halymenia plana U33133 447 152 34% NPA
Hexamita sp. Z17224 358 105 29% PDF | Text
Hildenbrandia rubra L19345 449 157 35% PDF | Text
Homo sapiens K03432 466 142 30% PDF | Text
Ichthyosporidium sp. L39110 335 98 29% PDF | Text
Janacekia debaisieuxi AJ252950 360 119 33% PDF | Text
Lecanora dispersa NPA 350 81 23% NPA
Lilioceris lilii NPA 446 200 45% NPA
Loma acerinae AJ252951 351 117 33% PDF | Text
Mastigamoeba balamuthi L23799 490 244 50% PDF | Text
Microgemma sp. AJ252952 343 132 38% PDF | Text
Microsporidium 57864 U90885 355 94 26% PDF | Text
Mus musculus X00686 448 154 34% PDF | Text
Mytilus edulis L24489 433 180 42% PDF | Text
Naegleria gruberi Thesis, Mullican J. 390 60 15% NPA
Nemalion helminthoides L26196 447 206 46% NPA
Nemalionopsis shawii AF506272 439 150 34% PDF | Text
Nosema algerae AF069063 394 114 29% PDF | Text
Nosema apis U97150 344 98 28% PDF | Text
Nosema necatrix U11051 322 77 24% PDF | Text
Okanagana utahensis U06478 457 180 39% PDF | Text
Onychodromus quadricornutus X53485 440 120 27% PDF | Text
Ophiopholis aculeata L28056 390 112 29% NPA
Oxytricha granulifera AF164122 439 141 32% PDF | Text
Oxytricha longa AF164125 441 182 41% PDF | Text
Palmaria palmata Z14142 447 203 45% NPA
Paraurostyla weissei AF164127 441 176 40% PDF | Text
Paruroleptus lepisma AF164132 440 148 34% PDF | Text
Paulinella chromatophora X81811 443 171 39% PDF | Text
Placopecten magellanicus X53899 428 126 29% PDF | Text
Plasmodium falciparum (A gene) M19172 503 233 46% PDF | Text
Plasmodium falciparum (S gene) M19173 492 150 30% PDF | Text
Plasmodium vivax (A gene) U07367 488 217 44% PDF | Text
Plasmodium vivax (O gene) U93095 505 193 38% PDF | Text
Plasmodium vivax (S gene) U07368 509 174 34% PDF | Text
Pleistophora hippoglossoideos AJ252953 361 96 27% PDF | Text
Pleistophora sp. U10342 329 109 33% PDF | Text
Pleurotricha lanceolota AF164128 440 128 29% PDF | Text
Plocamiocolax pulvinata U09618 453 151 33% NPA
Polydispyrenia simulii AJ252960 333 93 28% PDF | Text
Porphyra miniata NF AF175540 444 102 23% NPA
Porphyridium aerugineum L27635 442 159 36% NPA
Reticulitermes flavipes NPA 447 194 43% NPA
Rhodella maculata U21217 436 150 34% NPA
Rhodochaete parvula AF139462 436 153 35% NPA
Rhodogorgon carriebowensis AF006089 467 173 37% NPA
Rhodymenia leptophylla U09621 449 176 39% NPA
Saccharomyces cerevisiae U53879 451 183 41% PDF | Text
Spraguea lophii AF033197 345 101 29% PDF | Text
Staurastrum sp. M752 X74752 435 160 37% PDF | Text
Strongylocentrotus purpuratus L28055 390 127 33% PDF | Text
Stylonychia lemnae AF164124 442 148 33% PDF | Text
Stylonychia mytilus AF164123 441 156 35% PDF | Text
Thalassiosira eccentrica X85396 439 170 39% PDF | Text
Thelohania solenopsae AF031538 384 81 21% PDF | Text
Thelohania sp. AF031537 256 67 26% PDF | Text
Thorea hispida AF506273 437 164 38% PDF | Text
Thorea violacea AF026042 498 182 37% PDF | Text
Thorea violacea AF506274 437 191 44% PDF | Text
Toxoplasma gondii (P) X75453 412 154 37% PDF | Text
Trachipleistophora hominis AJ002605 355 119 34% PDF | Text
Tritrichomonas foetus M81842 397 156 39% PDF | Text
Uroleptus gallina AF164130 441 184 42% PDF | Text
Uroleptus pisces AF164131 441 177 40% PDF | Text
Urostyla grandis AF164129 437 175 40% PDF | Text
Vairimorpha necatrix Y00266 M24612 338 84 25% PDF | Text
Vairimorpha sp. Argentina AF031539 303 78 26% PDF | Text
Vavraia culicis AJ252961 354 149 42% PDF | Text
Visvesvaria acridophagus AF024658 399 156 39% PDF | Text
Weiseria palustris AF132544 369 115 31% PDF | Text
Xenopus laevis X04025 429 135 31% PDF | Text
  1. Only canonical base pairs (G-C,C-G,A-U,U-A,G-U,U-G) are considered.
  2. Secondary structure diagrams available in PDF and text formats. The pdf versions of the diagrams have correctly predicted base-pairs indicated with red tick-marks.
  3. NPA, Not Publically Available - The sequence used for analysis has not been deposited in Genbank.